SPNHC 2013 - Special Feature: iDigBio all-day symposium sponsored by iDigBio and the Natural Science Collections Alliance

Mon, 2013-07-22 13:54 -- djennings

From June 17-21, seven members of iDigBio (Gil NelsonPam SoltisJoanna McCaffreyLarry PageBruce MacFaddenKevin Love and Deborah Paul) participated in SPNHC 2013, which is the annual meeting of the Society for the Preservation of Natural History Collections (, fondly referred to as “spinach.” 

iDigBio Pamphlet Available

Wed, 2013-05-15 16:59 -- joanna

iDigBio has developed a pamphlet featuring brief descriptions about the aims of ADBC and iDigBio, with colorful, eye-catching digitization-related images. This material provides a simple and visual representation of iDigBio‘s mission, suitable for all audiences. We would love for you to distribute these within and beyond your institution in order to promote interest in iDigBio and digitization. If you would like one or more shipped to you domestically (no international), please send a request via this webform. You may also download a print-ready copy (22 MB PDF)

iDigBio Tours New UF CNS Data Center

Mon, 2013-04-08 15:39 -- kevinlove

Members of the iDigBio UF staff recently visited the new University of Florida Data Center at the Eastside Campus facility. The tour, led by Associate Director of Data Center Operations David Burdette, led visitors through the newly constructed $14M facility. The tour allowed visitors to see the complete operation, from the large server rooms, the monster backup power supplies, and the room chilling equipment.


Map of Life Collaboration Meeting

Tue, 2013-02-26 13:44 -- kevinlove

On Monday, February 25th, iDigBio PI's and project staff met with Walter Jetz,Ph.D. from the Map of Life project. Dr. Jetz shared with us how the The Map of Life assembles and integrates different sources of data describing species distributions worldwide. These data include expert species range maps, species occurrence points, ecoregions, and protected areas from providers like IUCN, WWF, GBIF, and more.

Update from the iDigBio Augmenting OCR working group

Sun, 2013-02-24 22:34 -- jaholliday

UPDATE II: More Details!!

Over the past 16 weeks, the aOCR wg has successfully orchestrated multiple initiatives intended to address some key issues on the working group's Wish List. Here, we briefly report on our recent Hackathon, held February 13-14, 2013 in Fort Worth, Texas, and on our "BioBlitz" at the iSchools iConference 2013, which was held February 12-15 in Forth Worth. We also discuss planned papers and new interactions resulting from these events. 

iDigBio Summit II Report

Thu, 2013-02-21 14:30 -- kevinlove


The second annual iDigBio Summit was held on October 23-24, 2012, in Gainesville, Florida, and was completed with great success!  The Summit promoted clarification of objectives, communication of progress towards achieving objectives, identification and discussion of challenges and opportunities, and collaboration among stakeholders.

1st Annual iDigBio Augumenting OCR Hackathon: Fort Worth, Texas, February 13-14

Thu, 2013-02-21 14:30 -- kevinlove


iDigBio Augmenting OCR Hackathon

February 13-14, 2013, in Fort Worth, Texas

 Be a part of helping to get "dark data" out of millions of museum cabinets and into online databases!

UPDATE! See Hackathon Wiki: and Participate Remotely!

Congratulations to Dr. Anna K. Monfils: iDigBio Visiting Scholar

Thu, 2013-02-21 14:30 -- kevinlove

Please join iDigBio in congratulating Dr. Anna Monfils on her selection as our 2012 Visiting Scholar.  Anna is an Associate Professor at Central Michigan University and Director of the Central Michigan University Herbarium.

Dr. Monfils' winning proposal includes building generalized, web-deliverable specimen databasing protocols, designing web-based teaching activities focused on databasing, and organizing a workshop aimed at professional botanists, students and citizen scientists from throughout Michigan.

Congratulations to Dr. Corey Toler-Franklin, iDigBio's 2013 Visiting Scholar

Tue, 2012-12-04 16:10 -- jaholliday

Corey Toler-Franklin is a University of California President's Postdoctoral Fellow in the Computer Science Department at UC Davis. She is investigating new methods for capturing and processing digital media formats and imaging modalities to create more comprehensive representations of biological specimens. Dr. Toler Franklin's project will take her to the collections of AMNH and Duke University's Lemur Center, where she plans to use non-invasive optical capture techniques to digitize recent and fossil primates.

iDigBio Poster Available

Wed, 2012-11-28 15:41 -- djennings

iDigBio has developed a poster that provides a simple and visual representation of iDigBio‘s mission. We would love for you to put one up in your institution in order to promote interest in iDigBio and digitization. If you would like one or more shipped to you domestically (no international), please send a request via this webform. You may also download a copy to print locally (65 MB PDF).

Bruce MacFadden, iDigBio Director of Education and Outreach

Wed, 2012-10-24 22:16 -- jaholliday

Dr. Bruce MacFadden is Curator of Paleontology at the Florida Museum of Natural History and Director of Education and Outreach for iDigBio. His responsibilities with iDigBio include oversight of educational and outreach activities and their assessment at iDigBio, the TCNs and at other digitization projects involving biological collections. Here, he discusses his early fascination with dinosaurs and paleontology, pivotal experiences in undergraduate and graduate school that helped shape his career, and then some of his professional accomplishments.

iDigBio's Train the Trainers Georeferencing Update II - Out of the Dark Ages

Wed, 2012-10-17 13:26 -- dpaul

The intensive, week-long First iDigBio Train-the-Trainers Georeferencing Workshop ended on October 12th, 2012. After a week, we are family and were sad to have to go home - but everyone seems very excited to get back to their own institutions to share what they learned and put it to good use in their own georeferencing and digitization projects.

iDigBio's Train the Trainers Georeferencing Update

Tue, 2012-10-09 16:38 -- dpaul

The First iDigBio Train-the-Trainers Georeferencing Workshop is well into Day 4 now! Day one, participants and instructors met iDigBio PI Pam Soltis, Project Manager David Jennings, Biodiversity Informatics Manager Joanna McCaffrey, Cathy Bester, iDigBio Program Assistant and Kevin Love, the iDigBio IT magician who keeps us all in touch with one another and connected to the internet. Shari Ellis, iDigBio Project Evaluator, shared results of the iDigBio Pre-Workshop Survey for this workshop with all the participants.

Public Participation in Digitization of Biodiversity Specimens Workshop Report

Tue, 2012-10-09 15:22 -- kevinlove

iDigBio’s Public Participation in Digitization of Biodiversity Specimens Workshop was held on September 28-29 in Gainesville, FL.

Topics included the role of citizen science, ways to engage the public in digitization, methods to build public participant virtual communities, and an overview of biodiversity informatics software to facilitate public participation. Visit the workshop wiki page for links to the final agenda, the GoogleDoc, and the presentations.

Meet David Jennings, iDigBio Project Manager

Wed, 2012-08-08 22:45 -- jaholliday


iDigBio is very pleased to welcome David Jennings as our new Project Manager! David is an industrial/mechanical engineer with over 18 years of experience in project management and leadership and will be responsible for overseeing day-to-day operations, developing requirements, coordinating activities within iDigBio, and coordinating activities between iDigBio and other networks/collections.

2012 Year in Review

Thu, 2012-07-26 15:21 -- kevinlove


On 30 June 2012, iDigBio completed its first year of operation. As the national resource for the NSF-funded Advancing Digitization of Biodiversity Collections(ADBC), our first year required that we identify and overcome major organizational hurdles as we develop a national infrastructure for the ADBC institutions. We are pleased to report that our first year was highly successful. In this article, we enumerate some of our major activities and accomplishments.

Seeking Effective Efficient Digitization - ZooKeys Publishes iDigBio's 5 Task Clusters

Fri, 2012-07-20 16:58 -- dpaul

Meet Corinna Gries, PI and head of the North American Lichens and Bryophytes TCN

Mon, 2012-07-09 14:28 -- jaholliday


Dr. Corinna Gries is PI and head of the North American Lichens and Bryophytes Thematic Collections Network. An accomplished researcher and programmer, here she is interviewed by Jill Holliday and discusses some of the history of specimen databasing, the goal of the North American Lichens and Bryophytes TCN, and the importance of public participation and crowd-sourcing to the TCN databasing projects.

Holliday:  Corinna, you are the head of the North American Lichens and Bryophytes TCN.


Public Participation in Digitization of Biodiversity Specimens Workshop

Wed, 2012-06-20 14:14 -- jgrabon


Public Participation in Digitization of Biodiversity Specimens Workshop
University of Florida, Gainesville, FL
September 28 - 29, 2012

iDigBio, the National Science Foundation’s national HUB for Advancing Digitization of Biodiversity Collections (ADBC), is offering a workshop focused on engaging the public in the digitization of the approximately one billion biodiversity specimens housed in collections across the U.S. The workshop will explore how to involve the public in ways that are interesting and educational but also efficient and reliable for the facilities managing the digitization.



Subscribe to RSS - Blog