NSF Solicitation: Advancing Digitization of Biological Collections
CONTACTS
A postdoctoral position is available with iDigBio in the research group of Austin Mast (Department of Biological Science, Florida State University; http://www.bio.fsu.edu/faculty-mast.php) to study engagement of the public in the digitization of biodiversity research collections, produce best practice and standards documents related to this in collaboration with relevant stakeholders, and assist in the design of interoperability between the iDigBio portal/cloud, public participation tools, and public participation content management systems. iDigBio (www.idigbio.org) is the central resource for NSF's Advancing Digitization of Biodiversity Collections Program (ADBC), and it is located at the University of Florida and Florida State University.
There are approximately 1 billion biodiversity specimens at US institutions, but only about 10% of these are digitized (e.g., databased, georeferenced, and/or digitally imaged). ADBC is funding large-scale, collaborative digitization by thematic collection networks (TCNs) focused on particular research themes. Seven TCNs involving 134 institutions have been funded to date, with more to be announced in July. Among other activities, iDigBio is overseeing implementation of standards and best practices for digitization in this community and developing a cloud environment for existing and future digital content about biodiversity specimens and a portal to it.
A Ph.D. in a relevant field (e.g., biodiversity research, biodiversity informatics) is required, as is demonstration of (1) familiarity with biodiversity collections and some aspect of their digitization, (2) familiarity with (or interest to learn) relevant principles of informatics, (3) successful collaboration and time management skills, and (4) successful written and oral communication skills. The postdoctoral scholar will be expected to interact positively and productively with a wide range of people (more so than in many other postdoctoral positions), including other members of iDigBio, members of the large ADBC community (e.g., in working groups and workshops), software developers working on digitization tools, other members of the citizen science community, and members of the public.
Annual salary starts at $40,000, and the position is expected to be for two years. It is based in Tallahassee, Florida, a small state capital bordered on the south and west by the Apalachicola National Forest and on the north by the historical hunting plantations of the Red Hills Region. White-sand beaches, clear freshwater springs, and hiking and biking trails are within easy driving distances of town. The region is one of North America's biotic hotspots.
To apply, send a cover letter and CV with contact information for three references in a single pdf file to Austin Mast (amast@bio.fsu.edu). In the cover letter, please cite past activities that demonstrate each of (1) through (4) above as well as provide the date on which you could start the position and a paragraph or two on your long-term career goals and how you see this position fitting into them. Applications will be considered beginning on July 8 until the position is filled. Florida State University is an Affirmative Action/Equal Opportunity Employer.
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This guide describes the formats and requirements for ingesting data into iDigBio.
Supported File Formats: iDigBio strives to make data ingestion into our infrastructure as easy as possible. To achieve this, we have identified two lowest common denominator export file formats that we will initially support for dataset ingestion.
Date: 23 May, 2013
CRIA and iDigBio Meeting
Today the CRIA and iDigBio teams met via adobeconnect to exchange ideas and share information.
Attendees:
CRIA: http://www.cria.org.br, http://splink.cria.org.br/index?&setlang=en
Dora Canhos, Director
Sidnei de Souza, IT
iDigBio: https://www.idigbio.org
On May 6th and 7th, 2013, in a barn 3 hours from the home of iDigBio at University of Florida in Gainesville, the entire staff of iDigBio from UF and Florida State University gathered at Tall Timbers Research Station just north of Tallahassee for a two day retreat. Getting together at one time and in one place to work together was a rare opportunity everyone appreciated. We shared stories, celebrated almost two years of our project, and worked on our strategic plan.
NEON is seeking members of the scientific community interested in and experienced in the area of scientific research collections to serve on the Collections Technical Working Group.
The Collections Technical Working Group will respond to NEON inquiries for input and comment on scientific, technical and implementation issues related to the collections program approximately four times per year. We seek a diverse group with expertise and experience in collections and archiving to help ensure that NEON collection activities have a strong scientific base and will produce a resource that is most useful to the community.
We invite self-nominations and/or suggestions of names of colleagues who might be interested. Please submit nominations by May 15th 2013.
For more information please follow the links below:
More about the Collections Technical Working Group
Nomination Form (self nominations are most welcome)
For more information or questions about the group: Michael Denslow, Assistant Director for Scientific Research Collections, mdenslow@neoninc.org
Welcome to the first annual iDigBio Retreat! Through a variety of activities, the retreat will provide an opportunity for us to enhance our teambuilding. In addition, the retreat will provide an open forum for the entire team to review iDigBio’s progress and our plans for the future. There is no “dress code” for the retreat (everything is intended to be casual).