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Research

 

Looking for research tools? 

How about scientific publications?

  • iDigBio Specimen Portal [1] has many millions of records to explore.
  • Try the Research Tools [2] being developed by the community.
  • Look in the Glossary of Terms [3] for tools, tricks and APIs.
  • DNA? Try DNA Banks and Genetic Resource Repositories in the U.S. [4]
  • Learn some new skills with Data Carpentry [5] or Software Carpentry [6].
  • Check out the monthly Biodiversity Spotlight [7] for tips and tricks!
  • Need to archive your biodiversity data? Learn more about Research Data Repositories [8].
  • Check out the Biodiversity Informatics Training [9] website.
  • Publications using the iDigBio data portal and/or authored by iDigBio personnel are available via the iDigBio Google Scholar Profile [10]
  • Publications citing ADBC, ADBC funded initatives including iDigbio and TCNS, using ADBC funded data portals, and/or authored by ADBC funded personnel. [11][Note: This resource is under development!]
  • iDigBio content tagged "Research" [12]
  • Supporting references for Nelson & Ellis (2018) The History and Impact of Digitization and Digital Data Mobilization on Biodiversity Research [13]

Publications resulting from ADBC funding:

Self-reported use of data in the iDigBio Portal:

Full report is available at: https://idigb.io/portalsurveyresults [14]

Research highlights of the ADBC Program

Learn more about each of the Thematic Collection Network (TCN) digitization projects via their wiki pages [15], or hear about their progress and research accomplishments by clicking on the links below.

2020

  • Building a global consortium of bryophytes and lichens: keystones of cryptobiotic communities (GLOBAL) [16] - 2020 Highlights [17]
  • Mobilizing Millions of Marine Mollusks of the Eastern Seaboard (ESB) [18] - 2020 Highlights [19]
  • Documenting Marine Biodiversity through Digitization of Invertebrate Collections (DigIn) [20] - 2020 Highlights [21]

2019

  • Digitizing collections to trace parasite-host associations and predict the spread of vector-borne disease (TPT) [22] - 2020 Highlights [23]
  • American Crossroads: Digitizing the Vascular Flora of the South-Central United States (TORCH) [24] - 2020 Highlights [25]
  • Enhancing Access to Taxonomic and Biogeographical Data to Stem the Tide of Extinction of the Highly Imperiled Pacific Island Land Snails (PILSBRY) [26] - 2020 Highlights [27]

2018

  • Capturing California's Flowers: Using Digital Images to Investigate Phenological Change in a Biodiversity Hotspot (CAP) [28] - 2020 Highlights [29]
  • The Pteridological Collections Consortium: An Integrative Approach to Pteridophyte Diversity Over the Last 420 Million Years (PCC) [30] - 2020 Highlights [31]
  • Digitizing "Endless Forms": Facilitating Research on Imperiled Plants with Extreme Morphologies (Endless Forms) [32] - 2020 Highlights [33]

2017

  • Using Herbarium Data To Document Plant Niches In The High Peaks And High Plains Of The Southern Rockies - Past, Present, And Future (SoRo) [34]- 2020 highlights [35]
  • oVert: Open Exploration of Vertebrate Diversity in 3D (oVert) [36]- 2020 highlights [37]

2016

  • Lepidoptera of North America Network: Documenting Diversity in the Largest Clade of Herbivores (LepNet)  [38]- 2020 highlights [39]
  • The Cretaceous World: Digitizing Fossils to Reconstruct Evolving Ecosystems in the Western Interior Seaway (Cretaceous World) [40] - 2020 highlights [41]
  • The Mid-Atlantic Megalopolis: Achieving a greater scientific understanding of our urban world (MAM)  [42]- 2020 highlights [43]

2015

  • The Microfungi Collections Consortium (MiCC) [44] - 2020 highlights [45]
  • Documenting Fossil Marine Invertebrate Communities of the Eastern Pacific (EPICC) [46] - 2020 highlights [47]

2014

  • Great Lakes Invasives (GLI) [48] - 2017 highlights [49]
  • InvertEBase [50] - 2020 highlights [51]
  • SouthEast Regional Network of Expertise and Collections (SERNEC) [52] - 2020 highlights [53]

2013

  • Fossil Insect Collaborative (FIC) [54] - 2018 highlights [55]
  • Vouchered Animal Communication Signals (VACS) [56] - 2017 highlights [57]
  • Macroalgal Herbarium Consortium (MHC) [58] - 2018 highlights [59]

2012

  • New England Vascular Plants (NEVP) [60] - 2017 highlights [61]
  • PaleoNICHES [62] - 2018 highlights [63]
  • Macrofungi Collection Consortium (MaCC) [64] - 2017 highlights [65]
  • Southwest Collections of Arthropods Network (SCAN) [66] - 2020 highlights [39]

2011

  • InvertNet [67] - 2017 highlights [68]
  • Tri-trophic (TTD) [69] - 2019 highlights [70]
  • Lichens & Bryophytes (LBCC) [71] - 2019 hightlights [72]

 

 

 

 

 

 


Source URL:https://www.idigbio.org/research

Links
[1] https://portal.idigbio.org [2] https://www.idigbio.org/content/community-research-tools [3] https://www.idigbio.org/wiki/index.php/Glossary_of_Terms [4] https://www.idigbio.org/genetic-resources [5] http://www.datacarpentry.org/ [6] http://software-carpentry.org/ [7] https://www.idigbio.org/tags/biodiversity-spotlight# [8] https://www.idigbio.org/content/can-idigbio-be-my-research-data-repository [9] http://biodiversity-informatics-training.org/ [10] https://scholar.google.com/citations?user=qMlVBMMAAAAJ&hl=en [11] https://idigbio.shinyapps.io/adbc-biblio/ [12] http://www.idigbio.org/tags/research [13] https://www.idigbio.org/sites/default/files/internal-docs/Supporting%20references%20for%20Nelson%20%26%20Ellis%20%282018%29%20updated.pdf [14] https://idigb.io/portalsurveyresults [15] https://www.idigbio.org/wiki/index.php/TCNs [16] https://www.idigbio.org/wiki/index.php/Building_a_global_consortium_of_bryophytes_and_lichens:_keystones_of_cryptobiotic_communities [17] https://www.idigbio.org/wiki/images/a/ae/IDigBio2020_BryoLichenTCN_BudkeKonrat.pdf [18] https://www.idigbio.org/wiki/index.php/Mobilizing_Millions_of_Marine_Mollusks_of_the_Eastern_Seaboard [19] https://www.idigbio.org/wiki/images/1/1f/Bieler_ESB_September2020.pdf [20] https://www.idigbio.org/wiki/index.php/Documenting_Marine_Biodiversity_through_Digitization_of_Invertebrate_Collections_(DigIn) [21] https://www.idigbio.org/wiki/images/8/83/Wetzer_DigIn_%E2%80%94_TCN_2020.pdf [22] https://www.idigbio.org/wiki/index.php/Digitizing_collections_to_trace_parasite-host_associations_and_predict_the_spread_of_vector-borne_disease [23] https://www.idigbio.org/wiki/images/f/f0/Zaspel_TPT.pdf [24] https://www.idigbio.org/wiki/index.php/American_Crossroads:_Digitizing_the_Vascular_Flora_of_the_South-Central_United_States [25] https://www.idigbio.org/wiki/images/d/d9/Barroso_Diego-TORCH_TCN-ADBC_Summit-2020-09-24.pdf [26] https://www.idigbio.org/wiki/index.php/Enhancing_Access_to_Taxonomic_and_Biogeographical_Data_to_Stem_the_Tide_of_Extinction_of_the_Highly_Imperiled_Pacific_Island_Land_Snails [27] https://www.idigbio.org/wiki/images/2/25/Yeung_ADBC_TCN_PILS2020_upload.pdf [28] https://www.idigbio.org/wiki/index.php/Capturing_California%27s_Flowers:_Using_Digital_Images_to_Investigate_Phenological_Change_in_a_Biodiversity_Hotspot [29] https://www.idigbio.org/wiki/images/0/0d/CAP_TCN_ADBCSummit2020_YOST.pdf [30] https://www.idigbio.org/wiki/index.php/The_Pteridological_Collections_Consortium:_An_integrative_Approach_to_Pteridophyte_Diversity_Over_the_Last_420_Million_Years [31] https://www.idigbio.org/wiki/images/b/b1/PCC_ADBC2020.pdf [32] https://www.idigbio.org/wiki/index.php/Digitizing_%22Endless_Forms%22:_Facilitating_Research_on_Imperiled_Plants_with_Extreme_Morphologies [33] https://www.idigbio.org/wiki/images/0/09/Pace_Endless_Forms.pdf [34] https://www.idigbio.org/wiki/index.php/Using_Herbarium_Data_to_Document_Plant_Niches_in_the_High_Peaks_and_High_Plains_of_the_Southern_Rockies_-_Past,_Present,_and_Future [35] https://www.idigbio.org/wiki/images/b/be/Southern_Rocky_Mountain_TCN_2020.pdf [36] https://www.idigbio.org/wiki/index.php/OVert:_Open_Exploration_of_Vertebrate_Diversity_in_3D [37] https://www.idigbio.org/wiki/images/9/91/Blackburn_oVert_Sept2020.pdf [38] https://www.idigbio.org/wiki/index.php/Lepidoptera_of_North_America_Network [39] https://www.idigbio.org/wiki/images/e/e4/SCAN_LepNet_ADBC2020.pdf [40] https://www.idigbio.org/wiki/index.php/The_Cretaceous_World [41] https://www.idigbio.org/wiki/images/b/be/Hendricks-CretaceousWorldTCN-iDigBioSummit-2020.pdf [42] https://www.idigbio.org/wiki/index.php/The_Mid-Atlantic_Megalopolis [43] https://www.idigbio.org/wiki/images/4/4d/Skema_MAM_2020.pdf [44] https://www.idigbio.org/wiki/index.php/The_Microfungi_Collections_Consortium:_A_Networked_Approach_to_Digitizing_Small_Fungi_with_Large_Impacts_on_the_Function_and_Health_of_Ecosystems [45] https://www.idigbio.org/wiki/images/2/26/IDigBio_MiCC_talk_2020.pdf [46] https://www.idigbio.org/wiki/index.php/Documenting_Fossil_Marine_Invertebrate_Communities_of_the_Eastern_Pacific_-_Faunal_Responses_to_Environmental_Change_over_the_last_66_million_years [47] https://www.idigbio.org/wiki/images/5/57/Marshall_EPICC_Sept_2020.pdf [48] https://www.idigbio.org/wiki/index.php/Documenting_the_Occurrence_through_Space_and_Time_of_Aquatic_Non-indigenous_Fish,_Mollusks,_Algae,_and_Plants_Threatening_North_America%27s_Great_Lakes [49] https://www.idigbio.org/wiki/images/d/da/GreatLakesInvasives_2017.pdf [50] https://www.idigbio.org/wiki/index.php/InvertEBase:_Reaching_Back_to_See_the_Future:_Species-rich_Invertebrate_Faunas_Document_Causes_and_Consequences_of_Biodiversity_Shifts [51] https://www.idigbio.org/wiki/images/d/dc/Shea_InvertEBase_ADBC2020.pdf [52] https://www.idigbio.org/wiki/index.php/The_Key_to_the_Cabinets:_Building_and_Sustaining_a_Research_Database_for_a_Global_Biodiversity_Hotspot [53] https://www.idigbio.org/wiki/images/b/b3/Denslow_SERNEC-TCNiDigBioSummit2020.pdf [54] https://www.idigbio.org/wiki/index.php/Fossil_Insect_Collaborative:_A_Deep-Time_Approach_to_Studying_Diversification_and_Response_to_Environmental_Change#Current_Research [55] https://www.idigbio.org/sites/default/files/workshop-presentations/summit8/Day-1/08-FIC_Summit_2018.pdf [56] https://www.idigbio.org/wiki/index.php/Developing_a_Centralized_Digital_Archive_of_Vouchered_Animal_Communication_Signals#Current_Research [57] https://www.idigbio.org/wiki/images/2/23/Webster_iDigBio_2017_Talk.pdf [58] https://www.idigbio.org/wiki/index.php/The_Macroalgal_Herbarium_Consortium:_Accessing_150_Years_of_Specimen_Data_to_Understand_Changes_in_the_Marine/Aquatic_Environment#Current_Research [59] https://www.idigbio.org/sites/default/files/workshop-presentations/summit8/Day-1/13-Macroalgae_Summit_2018.pdf [60] https://www.idigbio.org/wiki/index.php/Mobilizing_New_England_Vascular_Plant_Specimen_Data#Current_Research [61] https://www.idigbio.org/wiki/images/2/2d/Sweeney_NEVP_Summit_VI.pdf [62] https://www.idigbio.org/wiki/index.php/Creating_A_PALEONICHES#Current_Research [63] https://www.idigbio.org/sites/default/files/workshop-presentations/summit8/Day-1/07-CW-Paleoniches_Summit_2018.pdf [64] https://www.idigbio.org/wiki/index.php/The_Macrofungi_Collection_Consortium#Current_Research [65] https://www.idigbio.org/wiki/images/3/3f/Macc_Project_final_update_for_iDigBio_Summit_2017.pdf [66] https://www.idigbio.org/wiki/index.php/Southwest_Collections_of_Arthropods_Network_(SCAN)#Current_Research [67] https://www.idigbio.org/wiki/index.php/InvertNet:_An_Integrative_Platform_for_Research_on_Environmental_Change,_Species_Discovery_and_Identification#Current_Research [68] https://www.idigbio.org/wiki/images/b/b0/InvertNetidigbio2017_Summit_JMZ_Low.pdf [69] https://www.idigbio.org/wiki/index.php/Plants,_Herbivores,_and_Parasitoids:_A_Model_System_for_the_Study_of_Tri-trophic_Associations#Current_Research [70] https://www.idigbio.org/wiki/images/3/36/TriTrophic_2019.pdf [71] https://www.idigbio.org/wiki/index.php/North_American_Lichens_and_Bryophytes_-_Sensitive_Indicators_of_Environmental_Quality_and_Change#Current_Research [72] https://www.idigbio.org/wiki/images/a/ac/LBCC_2019.pdf