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OVert: Open Exploration of Vertebrate Diversity in 3D: Difference between revisions
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OVert: Open Exploration of Vertebrate Diversity in 3D (view source)
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=== Publications === | === Publications === | ||
Bardua, C., Fabre, A.C., Bon, M., Das, K., Stanley, E.L., Blackburn, D.C., & Goswami, A. (2020). Evolutionary integration of the frog cranium. Evolution, https://doi.org/10.1111/evo.13984.<br> | |||
Bock, A., Doraiswamy, H., Summers, A., & Silva, C. (2018). Topoangler: Interactive topology-based extraction of fishes. IEEE transactions on visualization and computer graphics, 24(1), 812-821.<br> | Bock, A., Doraiswamy, H., Summers, A., & Silva, C. (2018). Topoangler: Interactive topology-based extraction of fishes. IEEE transactions on visualization and computer graphics, 24(1), 812-821.<br> | ||
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Boyer, D.M. & Harrington, A.R. (2018). Scaling of bony canals for encephalic vessels in euarchontans: Implications for the role of the vertebral artery and brain metabolism. Journal of Human Evolution, 114, 85-101.<br> | Boyer, D.M. & Harrington, A.R. (2018). Scaling of bony canals for encephalic vessels in euarchontans: Implications for the role of the vertebral artery and brain metabolism. Journal of Human Evolution, 114, 85-101.<br> | ||
Boyer, D. M., Yapuncich, G. S., Dunham, N. T., McNamara, A., Shapiro, L. J., Hieronymus, T. L., & Young, J. W. (2019). My branch is your branch: Talar morphology correlates with relative substrate size in platyrrhines at Tiputini Biodiversity Station, Ecuador. Journal of Human Evolution, 133, 23-31.<br> | Boyer, D.M., Yapuncich, G.S., Dunham, N.T., McNamara, A., Shapiro, L.J., Hieronymus, T.L., & Young, J.W. (2019). My branch is your branch: Talar morphology correlates with relative substrate size in platyrrhines at Tiputini Biodiversity Station, Ecuador. Journal of Human Evolution, 133, 23-31.<br> | ||
Buser, T.J., Finnegan, D.L., Summers, A.P., & Kolmann, M.A. (2019). Have niche, will travel. New means of linking diet and ecomorphology reveals niche conservatism in freshwater cottoid fishes. Integrative Organismal Biology, 1(1), obz023.<br> | |||
Conway, K.W., Mateos, M., & Vrijenhoek, R.C. (2019). A new species of the live-bearing fish genus Poeciliopsis from northern Mexico (Cyprinodontiformes, Poeciliidae). ZooKeys, 883, 91.<br> | |||
Conway, K.W., Moore, G.I., & Summers, A.P. (2019). A new genus and two new species of miniature clingfishes from temperate southern Australia (Teleostei, Gobiesocidae). ZooKeys, 864, 35.<br> | |||
Conway, K.W., Stewart, A.L., & Summers, A.P. (2018). A new species of sea urchin associating clingfish of the genus ''Delllichthys'' from New Zealand (Teleostei, Gobeisocidae). ZooKeys, 740, 77-95.<br> | |||
Conway, K. W., | Conway, K.W., Stewart, A.L., & Summers, A.P. (2018). A new genus and species of clingfish from the Kermadec Islands of New Zealand (Teleostei: Gobiesocidae). ZooKeys, 786, 75-104.<br> | ||
Corn, K.A., Farina, S.C., Summers, A.P., & Gibb, A.C. (2018). Effects of organism and substrate size on burial mechanics of English sole, Parophrys vetulus. Journal of Experimental Biology, 221(18), jeb176131.<br> | |||
Early, C.M., Ridgely, R.C., & Witmer, L.M. (2020). Beyond endocasts: using predicted brain-structure volumes of extinct birds to assess neuroanatomical and behavioral inferences. Diversity, 12(1), 34.<br> | |||
Farina, S.C.,Knope, M.L., Corn, K.A., Summers, A.P., & Bemis, W.B.(2019). Functional coupling in the evolution of suction feeding and gill ventilation of sculpins (Perciformes: Cottoidei), Integrative and Comparative Biology, icz022. <br> | Farina, S.C.,Knope, M.L., Corn, K.A., Summers, A.P., & Bemis, W.B.(2019). Functional coupling in the evolution of suction feeding and gill ventilation of sculpins (Perciformes: Cottoidei), Integrative and Comparative Biology, icz022. <br> | ||
Griffing, A. H., Sanger, T. J., Daza, J. D., Nielsen, S. V., Pinto, B. J., Stanley, E. L., & Gamble, T. (2019). Embryonic development of a parthenogenetic vertebrate, the mourning gecko (Lepidodactylus lugubris). Developmental Dynamics.<br> | Griffing, A.H., Sanger, T.J., Daza, J.D., Nielsen, S.V., Pinto, B.J., Stanley, E.L., & Gamble, T. (2019). Embryonic development of a parthenogenetic vertebrate, the mourning gecko (Lepidodactylus lugubris). Developmental Dynamics.<br> | ||
Hall, K.C., Hundt, P.J., Swenson, J.D., Summers, A.P., & Crow, K.D. (2018) The evolution of underwater flight: The redistribution of pectoral fin rays, in manta rays and their relatives (Myliobatidae). Journal of Morphology, https://doi.org/10.1002/jmor.20837. <br> | Hall, K.C., Hundt, P.J., Swenson, J.D., Summers, A.P., & Crow, K.D. (2018) The evolution of underwater flight: The redistribution of pectoral fin rays, in manta rays and their relatives (Myliobatidae). Journal of Morphology, https://doi.org/10.1002/jmor.20837. <br> | ||
Harrington, A. R., Kuzawa, C. W., & Boyer, D. M. (2019). Carotid foramen size in the human skull tracks developmental changes in cerebral blood flow and brain metabolism. American Journal of Physical Anthropology.<br> | Harrington, A.R., Kuzawa, C.W., & Boyer, D.M. (2019). Carotid foramen size in the human skull tracks developmental changes in cerebral blood flow and brain metabolism. American Journal of Physical Anthropology.<br> | ||
Hedrick, B.P., Heberling, J.M., Meineke, E.K., Turner, K.G., Grassa, C.J., Park, D.S., Kennedy, J., Clarke, J.A., Cook, J.A., Blackburn, D.C. & Edwards, S.V. (2020). Digitization and the future of natural history collections. BioScience, 70(3), 243-251.<br> | |||
Hoke, K.L., Adkins-Regan, E., Bass, A.H., McCune, A.R., & Wolfner, M.F. (2019). Co-opting evo-devo concepts for new insights into mechanisms of behavioural diversity. Journal of Experimental Biology, 222(8), jeb190058.<br> | |||
Hongjamrassilp, W., Summers, A.P., & Hastings, P.A. (2018). Heterochrony in fringeheads (''Neoclinus'') and amplification of an extraordinary aggressive display in the Sarcastic Fringehead (Teleostei: Blenniiformes). Journal of Morphology.<br> | |||
Huie, J.M., Summers, A.P., & Kolmann, M.A. (2019). Body shape separates guilds of rheophilic herbivores (Myleinae: Serrasalmidae) better than feeding morphology. Proceedings of the Academy of Natural Sciences of Philadelphia, 166(1), 1-15.<br> | |||
Lewis, Z. R., Dorantes, J. A., & Hanken, J. (2018). Expression of a novel surfactant protein gene is associated with sites of extrapulmonary respiration in a lungless salamander. Proceedings of the Royal Society B, 285(1888), 20181589.<br> | Huie, J.M., Thacker, C., & Tornabene, L. (2019). Co‐evolution of cleaning and feeding morphology in the western Atlantic and eastern Pacific gobies. Evolution, https://doi.org/10.1111/evo.13904.<br> | ||
Kolmann, M.A., Huie, J.M., Evans, K., & Summers, A.P. (2018). Specialized specialists and the narrow niche fallacy: a tale of scale-feeding fishes. Royal Society Open Science, 5(1), 171581.<br> | |||
Leão, M.D.V., Carvalho, T.P., Reis, R.E., & Wosiacki, W.B. (2019). A new species of Pseudobunocephalus Friel, 2008 (Siluriformes: Aspredinidae) from the lower Tocantins and Mearim river drainages, North and Northeast of Brazil. Zootaxa, 4586(1), 109-126.<br> | |||
Lewis, Z.R., Dorantes, J.A., & Hanken, J. (2018). Expression of a novel surfactant protein gene is associated with sites of extrapulmonary respiration in a lungless salamander. Proceedings of the Royal Society B, 285(1888), 20181589.<br> | |||
Lundberg, J.G., Hendrickson, D.A., Luckenbill, K.R. & Arce, M. (2017). Satan's skeleton revealed: a tomographic and comparative osteology of ''Satan eurystomus'', the subterranean Widemouth Blindcat (Siluriformes, Ictaluridae). Proceedings of the Academy of Natural Sciences of Philadelphia, 165(1), 117-173.<br> | |||
Marramà, G., & Carnevale, G. (2017). The relationships of "Gasteroclupea branisai" Signeux, 1964, a freshwater double-armored herring (Clupeomorpha, Ellimmicthyiformes) from the Late Cretaceous-Paleocene of South America. Historical Biology, 29(7), 904-917.<br> | Marramà, G., & Carnevale, G. (2017). The relationships of "Gasteroclupea branisai" Signeux, 1964, a freshwater double-armored herring (Clupeomorpha, Ellimmicthyiformes) from the Late Cretaceous-Paleocene of South America. Historical Biology, 29(7), 904-917.<br> | ||
Nelson, G., & Ellis, S. (2019). The history and impact of digitization and digital data on biodiversity research. Philosophical Transactions of the Royal Society B, 374(1763), 20170391.<br> | |||
Page, L.M., Ray, B.C., Tongnunui, S., Boyd, D.A., & Randall, Z.S. (2019). Garra surinbinnani, a new species of labeonine from the Mae Khlong basin of Thailand (Teleostei: Cyprinidae). Ichthyological Exploration of Freshwaters, http://doi.org/10.23788/IEF-1117.<br> | |||
Paluh, D.J., Stanley, E.L., & Blackburn, D.C. (2020). Evolution of hyperossification expands skull diversity in frogs. Proceedings of the National Academy of Sciences, 117(15), 8554-8562.<br> | |||
Prestridge, H.L., & Conway, K.L. (2019). TCWC – The Collection of Fishes at the Biodiversity Research and Teaching Collections, Texas A&M University. Boletim Sociedade Brasileira de Ictiologia, 129, 121-124.<br> | |||
Robins, R.H., Brown, M.E., & Crutchfield, R.A. (2020). Identification of acara (Cichlidae: Cichlasoma) established in Florida, USA. BioInvasions Record, 9(1), 133-145.<br> | |||
Rutledge, K.M., Summers, A.P., & Kolmann, M.A. (2019). Killing them softly: Ontogeny of jaw mechanics and stiffness in mollusk‐feeding freshwater stingrays. Journal of Morphology.<br> | |||
Stocker, M.R., Nesbitt, S.J., Kligman, B.T., Paluh, D.J., Marsh, A.D., Blackburn, D.C., & Parker, W.G. (2019). The earliest equatorial record of frogs from the Late Triassic of Arizona. Biology Letters, 15(2), 20180922.<br> | |||
Vijayakumar, S.P., Pyron, R.A., Dinesh, K.P., Torsekar, V.R., Srikanthan, A.N., Swamy, P., ... & Shanker, K. (2019). A new ancient lineage of frog (Anura: Nyctibatrachidae: Astrobatrachinae subfam. nov.) endemic to the Western Ghats of Peninsular India. PeerJ, 7.<br> | |||
Yapuncich, G.S., Feng, H.J., Dunn, R.H., Seiffert, E.R., & Boyer, D.M. (2019). Vertical support use and primate origins. Scientific reports, 9(1), 1-10.<br> | |||
Yopak, K.E., Carrier, J.C., & Summers, A.P. (2018). Imaging technologies in the field and laboratory. In Shark Research: Emerging Technologies and Applications for the Field and Laboratory. J.C. Carrier & M.R. Heithaus, eds.<br> | |||
Watkins-Colwell, G.J., Love, K., Randall, Z., Boyer, D.M., Winchester, J.M., Stanley, E.L., & Blackburn, D.C. (2018) The Walking Dead: status report, data workflow and best practices of the oVert Thematic Collections Network. Biodiversity Information Science and Standards 2: e26078. | Watkins-Colwell, G.J., Love, K., Randall, Z., Boyer, D.M., Winchester, J.M., Stanley, E.L., & Blackburn, D.C. (2018) The Walking Dead: status report, data workflow and best practices of the oVert Thematic Collections Network. Biodiversity Information Science and Standards 2: e26078. | ||
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Gardner, J. & L. Tornabene. Rolling the dice: diffusible iodine-based contrast-enhanced computed tomography (diceCT) methods for visualization of soft tissues. Annual Meeting of the Gilbert Ichthyological Society, Blue River, OR. October 2018. <br> | Gardner, J. & L. Tornabene. Rolling the dice: diffusible iodine-based contrast-enhanced computed tomography (diceCT) methods for visualization of soft tissues. Annual Meeting of the Gilbert Ichthyological Society, Blue River, OR. October 2018. <br> | ||
Hall, K.C., Hundt, P., Swenson, J., Summers, A., Crow, K.D. The evolution of underwater flight in manta rays and their relatives (Myliobatidae). Experimental Biology, San Diego, CA. April 2018. <br> | |||
Hanken, J. The advent of digital technology and its promise for biodiversity research. iDigBio Digital Data in Biodiversity Research Conference, Berkeley, CA. June 2018. <br> | Hanken, J. The advent of digital technology and its promise for biodiversity research. iDigBio Digital Data in Biodiversity Research Conference, Berkeley, CA. June 2018. <br> | ||
Hilton, E.J. Fishes and the new golden age of morphology. Gilbert Ichthyological Society, Blue River, OR. October 2018. <br> | Hilton, E.J. Fishes and the new golden age of morphology. Gilbert Ichthyological Society, Blue River, OR. October 2018. <br> | ||
Hofmann, M. Web-based delivery and volume visualization of 30TB of high resolution tomography data. 24th International Conference on 3D Web Technology, Los Angeles, CA. July 2019. <br> | |||
Huber, S., K. Maslenikov, A. Williston, E. Hilton, A. Summers, D. Blackburn. oVert Deep Dive: Ontogenetic Series of Fishes. Joint Meeting of Ichthyologists and Herpetologists, Rochester, NY. July 2018. <br> | Huber, S., K. Maslenikov, A. Williston, E. Hilton, A. Summers, D. Blackburn. oVert Deep Dive: Ontogenetic Series of Fishes. Joint Meeting of Ichthyologists and Herpetologists, Rochester, NY. July 2018. <br> | ||
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Stanley, E., D. Paluh, D. Blackburn. Diversification of dermal armor in squamates. Joint Meeting of Ichthyologists and Herpetologists, Rochester, NY. July 2018. <br> | Stanley, E., D. Paluh, D. Blackburn. Diversification of dermal armor in squamates. Joint Meeting of Ichthyologists and Herpetologists, Rochester, NY. July 2018. <br> | ||
Summers, A.P. How and why to scan all the vertebrates: open access data as a transformative tool. Experimental Biology, San Diego, CA. April 2018. <br> | |||
Takano, O.M., J.M. Bates, J.P. Dumbacher, B.D. Marks, R.G. Moyle, A.T. Peterson, J. Wieczorek, D.W. Winkler, H.F. James, D.W. Steadman, C.M. Eliason, E.L. Stanley, D.C. Blackburn. Inside the Birds of the World: CT-scanning fluid-preserved bird collections via the oVert Thematic Collections Network. American Ornithological Society, Tucson, AZ. April 2018. <br> | Takano, O.M., J.M. Bates, J.P. Dumbacher, B.D. Marks, R.G. Moyle, A.T. Peterson, J. Wieczorek, D.W. Winkler, H.F. James, D.W. Steadman, C.M. Eliason, E.L. Stanley, D.C. Blackburn. Inside the Birds of the World: CT-scanning fluid-preserved bird collections via the oVert Thematic Collections Network. American Ornithological Society, Tucson, AZ. April 2018. <br> | ||