Strategies for Vertebrate Digitization Workshop: Difference between revisions
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! colspan="2" style="background:#D58B28;width:200px;font-size:10pt" | Digitizing the Past and Present for the Future | |||
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| colspan="2" style="text-align:center;font-size:7pt" | <!--YOU CAN INSERT A NEW IMAGE FOR THE LOGO BETWEEN THE COLON AND THE PIPE-->[[Image:IDigBio Logo RGB.png|center|300px|iDigBio Logo RGB.png]]<br /> | |||
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!colspan="2" style="background:#D58B28;text-align:center;font-size:9pt" | Quick Links for Summit 2014 Workshop | |||
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|[[Media:Agenda_(1).pdf|Strategies for Vertebrate Digitization Workshop Agenda]] | |||
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|[https://www.idigbio.org/biblio?f%5bkeyword%5d=476 Strategies for Vertebrate Digitization Biblio Entries] | |||
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| Strategies for Vertebrate Digitization Workshop Report | |||
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==This wiki provides support for the Strategies for Vertebrate Digitization Workshop to be held at Cornell University, 4-7 May 2015== | ==This wiki provides support for the Strategies for Vertebrate Digitization Workshop to be held at Cornell University, 4-7 May 2015== | ||
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==Presentations== | ==Presentations== | ||
Monday, 4 May 2015 | Monday, 4 May 2015 | ||
*[[Media:IDigBio_Intro_CT_Ithaca.pdf| | *[[Media:IDigBio_Intro_CT_Ithaca.pdf|Introduction to iDigBio (Gil Nelson)]] | ||
*[[Media:Edwards_NSF_Cornell_2015.pdf|Mechanisms of community input and the future of digitizaiton at NSF (Scott Edwards)]] | *[[Media:Edwards_NSF_Cornell_2015.pdf|Mechanisms of community input and the future of digitizaiton at NSF (Scott Edwards)]] | ||
*[[Media:Thompson-iDigBio_Presentation.pdf|Why digitize vertebrate collections? (Cody Thompson)]] | *[[Media:Thompson-iDigBio_Presentation.pdf|Why digitize vertebrate collections? (Cody Thompson)]] | ||
* | *Introduction to media (Mike Webster) | ||
*[[Media:Schmidt-Cornell.pdf|Challenges facing small museums with moderate collections and minimal resources (Curtis Schmidt)]] | *[[Media:Schmidt-Cornell.pdf|Challenges facing small museums with moderate collections and minimal resources (Curtis Schmidt)]] | ||
*[[Media:iDigBio Workshop Ruedas.pdf|Resource challenges for small institutions (Luis Ruedas)]] | *[[Media:iDigBio Workshop Ruedas.pdf|Resource challenges for small institutions (Luis Ruedas)]] | ||
| Line 28: | Line 42: | ||
*[[Media:IDigBio_2015_GMBL_Salcedo.pdf|Digitizing catalog and ledger data for scientific research (Norma Salcedo)]] | *[[Media:IDigBio_2015_GMBL_Salcedo.pdf|Digitizing catalog and ledger data for scientific research (Norma Salcedo)]] | ||
*[[Media:Gunderson-arctos_iDigBio_2015_AMG.pdf|Arctos as a database management system for vertebrate specimens and images (Aren M. Gunderson, Link Olson)]] | *[[Media:Gunderson-arctos_iDigBio_2015_AMG.pdf|Arctos as a database management system for vertebrate specimens and images (Aren M. Gunderson, Link Olson)]] | ||
* | *Specify as a database management system for vertebrate specimens and images (Andy Bentley) | ||
*[[Symbiota as a database management system for vertebrate specimens and images (Ed Gilbert)]] | *[[Media:symbiota_as_a_database_management_system_for_vertebrate_specimens_and_images.pdf|Symbiota as a database management system for vertebrate specimens and images (Ed Gilbert)]] | ||
Tuesday, 5 May 2015 | Tuesday, 5 May 2015 | ||
| Line 38: | Line 52: | ||
*[[Media:VertDigWorkshop_WillistonImagWet_FINAL.pdf|Imaging wet collections (Andy Williston)]] | *[[Media:VertDigWorkshop_WillistonImagWet_FINAL.pdf|Imaging wet collections (Andy Williston)]] | ||
*[[Media:VeterbrateDigitization_ImagingBirds_Mammals.pdf|Imaging Birds and Mammals (Gil Nelson)]] | *[[Media:VeterbrateDigitization_ImagingBirds_Mammals.pdf|Imaging Birds and Mammals (Gil Nelson)]] | ||
* | *Explore your world: Non-invasive high resolution CT in reserarch, outreach, and teaching (Mark Riccio) | ||
*[[Media:McCune-idigBioTalk.pdf|CT scanning of museum specimens in research: a case study]] | *[[Media:McCune-idigBioTalk.pdf|CT scanning of museum specimens in research: a case study]] | ||
*[[Media:VertDigWorksho_WillistonCT_FINAL.pdf|Specimen CT imaging/3D modeling at MCZ (Andy Williston)]] | *[[Media:VertDigWorksho_WillistonCT_FINAL.pdf|Specimen CT imaging/3D modeling at MCZ (Andy Williston)]] | ||
| Line 49: | Line 63: | ||
*[[Media:Lopez-iDigBio_CitizenScience.pdf|Integration of citizen science activities with research collection databases (Andres Lopez)]] | *[[Media:Lopez-iDigBio_CitizenScience.pdf|Integration of citizen science activities with research collection databases (Andres Lopez)]] | ||
*[[Media:Singer-Ithaca EO Talk 2015.pdf|Creative methods for utilizing collections for education and outreach (Randy Singer)]] | *[[Media:Singer-Ithaca EO Talk 2015.pdf|Creative methods for utilizing collections for education and outreach (Randy Singer)]] | ||
* | *eBird (Steve Kelling) | ||
*[[Media:IDigBio_GAM.pdf|Restoring natural history collections of native amphibians and reptiles in South Dakota (Gabrielle Maltaverne)]] | *[[Media:IDigBio_GAM.pdf|Restoring natural history collections of native amphibians and reptiles in South Dakota (Gabrielle Maltaverne)]] | ||
*[[Media:Prestridge-Leveraging_Library_Resources.pdf|Leveraging library resources for storing and curating media (images primarily) associated with specimens (Heather Prestridge)]] | *[[Media:Prestridge-Leveraging_Library_Resources.pdf|Leveraging library resources for storing and curating media (images primarily) associated with specimens (Heather Prestridge)]] | ||
* | *Introduction to media (Ed Scholes) | ||
*[[Media:Medler-Digitizing-managing-futureproofing media FINAL.pdf|Digitizing, managing and future proofing media yourself (Greg Budney and Matt Medler)]] | *[[Media:Medler-Digitizing-managing-futureproofing media FINAL.pdf|Digitizing, managing and future proofing media yourself (Greg Budney and Matt Medler)]] | ||
*[[Media:Brown.frogs.and.media.pdf|Co-collection of physical and media specimens: why bother? (frogs) (Rafe Brown)]] | *[[Media:Brown.frogs.and.media.pdf|Co-collection of physical and media specimens: why bother? (frogs) (Rafe Brown)]] | ||
* | *Co-collection of physical and multimedia bird specimens: opportunities and challenges in the field (Brent Benz) | ||
* | *Co-collection of physical and media specimens: why bother? (fish) (John Sullivan) | ||
Thursday, 7 May 2015 | Thursday, 7 May 2015 | ||
* | *Biodiversity media in the 21st century (Mike Webster) | ||
*[[Media:Nelson_AdvancingAccessDigitalMedia.pdf|Discussion 1: What should be preserved? (Gil Nelson)]] | *[[Media:Nelson_AdvancingAccessDigitalMedia.pdf|Discussion 1: What should be preserved? (Gil Nelson)]] | ||
*[[Media:Discussion2.pdf|Discussion 2: How to preserve it? (Ed Scholes)]] | *[[Media:Discussion2.pdf|Discussion 2: How to preserve it? (Ed Scholes)]] | ||
Latest revision as of 12:51, 2 November 2018
| Digitizing the Past and Present for the Future | |
|---|---|
 | |
| Quick Links for Summit 2014 Workshop | |
| Strategies for Vertebrate Digitization Workshop Agenda | |
| Strategies for Vertebrate Digitization Biblio Entries | |
| Strategies for Vertebrate Digitization Workshop Report | |
This wiki provides support for the Strategies for Vertebrate Digitization Workshop to be held at Cornell University, 4-7 May 2015
Digitization Resources Home
Workshop Announcement
Agenda and Logistics
- Tentative Workshop Agenda
- Activities Description
- Workshop Logistics
- Agenda, invited follow-on meeting, 7 May
Presentations
Monday, 4 May 2015
- Introduction to iDigBio (Gil Nelson)
- Mechanisms of community input and the future of digitizaiton at NSF (Scott Edwards)
- Why digitize vertebrate collections? (Cody Thompson)
- Introduction to media (Mike Webster)
- Challenges facing small museums with moderate collections and minimal resources (Curtis Schmidt)
- Resource challenges for small institutions (Luis Ruedas)
- Getting started with digitization (Molly Hagermann)
- Data standards (Greg Riccardi)
- Digitizing catalog and ledger data for scientific research (Norma Salcedo)
- Arctos as a database management system for vertebrate specimens and images (Aren M. Gunderson, Link Olson)
- Specify as a database management system for vertebrate specimens and images (Andy Bentley)
- Symbiota as a database management system for vertebrate specimens and images (Ed Gilbert)
Tuesday, 5 May 2015
- Is specimen imaging important in vertebrate collections? (Molly Hagemann)
- What to database and image? (Molly Hagemann)
- Online measuring (Kevin Nixon)
- Imaging wet collections (Andy Bentley)
- Imaging wet collections (Andy Williston)
- Imaging Birds and Mammals (Gil Nelson)
- Explore your world: Non-invasive high resolution CT in reserarch, outreach, and teaching (Mark Riccio)
- CT scanning of museum specimens in research: a case study
- Specimen CT imaging/3D modeling at MCZ (Andy Williston)
- VertNet/GBIF (Carla Cicero)
- Getting your data out there: Data publishing & data standards with iDigBio (Molly Phillips)
- Global Genomic Biorepositories Network (Jon Coddington)
Wednesday, 6 May 2015
- Integration of citizen science activities with research collection databases (Andres Lopez)
- Creative methods for utilizing collections for education and outreach (Randy Singer)
- eBird (Steve Kelling)
- Restoring natural history collections of native amphibians and reptiles in South Dakota (Gabrielle Maltaverne)
- Leveraging library resources for storing and curating media (images primarily) associated with specimens (Heather Prestridge)
- Introduction to media (Ed Scholes)
- Digitizing, managing and future proofing media yourself (Greg Budney and Matt Medler)
- Co-collection of physical and media specimens: why bother? (frogs) (Rafe Brown)
- Co-collection of physical and multimedia bird specimens: opportunities and challenges in the field (Brent Benz)
- Co-collection of physical and media specimens: why bother? (fish) (John Sullivan)
Thursday, 7 May 2015
- Biodiversity media in the 21st century (Mike Webster)
- Discussion 1: What should be preserved? (Gil Nelson)
- Discussion 2: How to preserve it? (Ed Scholes)
- Discussion 3: Maximizing scientific impact (Greg Riccardi)
- Discussion 4: Databasing and linking (David Winkler)
Advancing the Accessibility of Digital Media for Biological Research in the 21st Century, May 7
Workshop Recordings
Monday, 4 May 2015
- 8am-9am: http://idigbio.adobeconnect.com/p21s7w1n1io/
- 1pm-2:30pm: http://idigbio.adobeconnect.com/p5vbgmx1jv5/
- 3pm-5:30pm: http://idigbio.adobeconnect.com/p58a01rpjy4/
Tuesday, 5 May 2015
- 11am-12pm: http://idigbio.adobeconnect.com/p4z27tsnll9/
- 1pm-3pm: http://idigbio.adobeconnect.com/p50h9eskjv2/
- 3:15pm-6pm: http://idigbio.adobeconnect.com/p3nk938dsn9/
Wednesday, 6 May 2015
- 11am-12:30pm: http://idigbio.adobeconnect.com/p3asuxgidho/
- 1:30pm-3pm: http://idigbio.adobeconnect.com/p17as30mw1d/
- 3:10-4:30pm: http://idigbio.adobeconnect.com/p5tjnpo05y0/
Thursday, 7 May 2015
- 8am-8:30am: http://idigbio.adobeconnect.com/p1jpevg7rox/
- Discussion 1 Summary: http://idigbio.adobeconnect.com/p3omjapol1c/
- Discussion 2 Intro: http://idigbio.adobeconnect.com/p8rvxthd0pk/
- Discussion 2 Summary: http://idigbio.adobeconnect.com/p6dr15vthyk/
- Discussion 3 Intro: http://idigbio.adobeconnect.com/p1cm705q2n7/
- Discussion 3 Summary: http://idigbio.adobeconnect.com/p1wgt1w78s0/
- Discussion 4 Intro: http://idigbio.adobeconnect.com/p249jpobua1/
- Discussion 4 Summary: http://idigbio.adobeconnect.com/p2v7dmqbcuj/
- End of day discussion and wrap up: http://idigbio.adobeconnect.com/p4fkd813luf/
Workshop Resources
- NIBA Strategic Plan
- NIBA Implementation Plan
- Small Collections Network (SCNet) website
- Global Repository of Biological Collections
- Mammal Collections in the Western Hemisphere
- Scientific Collections and Emerging Infectious Diseases: Report of an Interdisciplinary Workshop
- Publications Utilizing UTCT Data
- iDigBio Workflow Modules and Task Lists
- Link to paleo imaging wiki
- Omeka
- Preparing the Workforce for Digital Curation
- iNaturalist.org
Planning Team
- Molly Hagemann (Bishop Museum)
- Gil Nelson (iDigBio/Florida State University)
- Cody Thompson (University of Michigan Museum of Zoology)
- Mike Webster (Cornell Laboratory of Ornithology)