Mobilizing New England Vascular Plant Specimen Data: Difference between revisions

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 === Publications ===
 Daru, B.H., Park, D.S., Primack, R., Willis, C.G., Barrington, D.S., Whitfeld, T.J., Seidler, T.G., Sweeney, P.W., Foster, D.R., Ellison, A.M. and Davis, C.C., (2017). Widespread sampling biases in herbaria revealed from large-scale digitization. bioRxiv, p.165480.<br>
+Davis, C. C., Willis, C. G., Connolly, B., Kelly, C., & Ellison, A. M. (2015). Herbarium records are reliable sources of phenological change driven by climate and provide novel insights into species’ phenological cueing mechanisms. American Journal of Botany, 102(10), 1599-1609.doi:10.3732/ajb.1500237<br>
+Ellwood, E. R., Kimberly, P., Guralnick, R., Flemons, P., Love, K., Ellis, S., ... & Costello, R. (2018). Worldwide Engagement for Digitizing Biocollections (WeDigBio): The Biocollections Community's Citizen-Science Space on the Calendar. BioScience, 68. doi:10.1093/biosci/bix143<br>
+Everill, Peter H., Primack, Richard B., Ellwood, Elizabeth R. and Melaas, Eli K.(2014). Determining Past Leaf-Out Times of New England?s Deciduous Forests From Herbarium Specimens, American Journal of Botany,101,1293. doi:10.3732/ajb.1400045<br>
 Lorieul, T., Pearson, K. D., Ellwood, E. R., Goëau, H., Molino, J. F., Sweeney, P. W., ... & Soltis, P. S. (2019). Toward a large‐scale and deep phenological stage annotation of herbarium specimens: Case studies from temperate, tropical, and equatorial floras. Applications in Plant Sciences, 7(3).<br>
-Willis, C. G., Ellwood, E. R., Primack, R. B., Davis, C. C., Pearson, K. D., Gallinat, A. S., ... & Sparks, T. H. (2017). Old Plants, New Tricks: Phenological Research Using Herbarium Specimens. Trends in ecology & evolution.
+Nelson, G., Sweeney, P. and Gilbert, E.(2018). Use of globally unique identifiers (GUIDs) to link herbarium specimen records to physical specimens,Applications in Plant Sciences, 6, e1027. doi:10.1002/aps3.1027<br>
+Nelson, G., Sweeney, P., Wallace, L.E., Rabeler, R.K., Allard, D., Brown, H., Carter, J.R., Denslow, M.W., Ellwood, E.R., Germain-Aubrey, C.C., Gilbert, E.P., Gillespie, E., Goertzen, L.R., Legler, B., Marchant, D.B., Marsico, T.D., Morris, A.B., Murrell, Z., Nazaire, M., Neefus, C., Oberreiter, S., Paul, D., Ruhfel, B.R., Sasek, T., Shaw, J., Soltis, P. Watson, K., Weeks A., & Mast, A.R. (2015). Digitization workflows for flat sheets and packets of plants, algae, and fungi Applications in Plant Sciences, doi:10.3732/apps.1500065<br>
+Pearse, W. D., Davis, C. C., Inouye, D. W., Primack, R. B., & Davies, T. J. (2017). A statistical estimator for determining the limits of contemporary and historic phenology. Nature ecology & evolution, 1(12), 1876. doi:10.1038/s41559-017-0350-0<br>
+Schorn, C., Weber, E., Bernardos, R., Hopkins, C., & Davis, C. (2016). The New England Vascular Plants Project: 295,000 specimens and counting. Rhodora, 118(975), 324.https://doi.org/10.3119/15-34
+Sweeney, P. and Gilbert, E. (2017). Documenting Reproductive Phenology using Herbarium Specimens: Experiences from the New England Vascular Plants Project Biodiversity Information Science and Standards, v.1, p. e20430. doi:10.3897/tdwgproceedings.1.20430<br>
+Sweeney, P.W., Starly, B., Morris, P.J., Xu, Y., Jones, A., Radhakrishnan, S., ... & Davis, C.C. (2018). Large-scale digitization of herbarium specimens: Development and usage of an automated, high-throughput conveyor system. Taxon, 67(1), 165-178. https://doi.org/10.12705/671.9<br>
+Whitfeld, T., McCauley, K, & Edwards, E.J. (2014). Calling attention to the new Brown University Herbarium, Rhodora, 116. doi:10:3119/14-02<br>
+Willis, C.G., Ellwood, E.R., Primack, R.B., Davis, C.C., Pearson, K.D., Gallinat, A.S., ... & Sparks, T.H. (2017). Old Plants, New Tricks: Phenological Research Using Herbarium Specimens. Trends in ecology & evolution. 32(7), 531-546. https://doi.org/10.1016/j.tree.2017.03.015 208835<br>
+Willis, C. G., Law, E., Williams, A. C., Franzone, B. F., Bernardos, R., Bruno, L., Hopkins, C., Schorn, C., Weber, E., Park, D. S. and Davis, C. C. (2017), CrowdCurio: an online crowdsourcing platform to facilitate climate change studies using herbarium specimens. New Phytol, 215: 479–488. doi:10.1111/nph.14535<br>
+Yost, J.M., Sweeney, P.W., Gilbert, E., Nelson, G., Guralnick, R., Gallinat, A.S., Ellwood, E.R., Rossington, N., Willis, C.G., Blum, S.D. and Walls, R.L. (2018). Digitization protocol for scoring reproductive phenology from herbarium specimens of seed plants. Applications in Plant Sciences, 6,e1022. doi:10.1002/aps3.1022<br>
 === Professional Presentations ===
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 ''Principal Investigator (PIs)'':
 [mailto:bthiers@nybg.org Barbara Thiers]
+===Partnership to the New England Vascular Plant Network (NEVP) for the Environmental Management and Monitoring Alliance (EMMA)===
+Herbaria, collections of pressed and dried plant specimens, provide windows into the past. They tell us what kinds of plants were present, where those plants were, and when the plants were there. With this information we can track changes over time, such as the return of wildflowers and forest trees to previously farmed land, and the introduction and spread of invasive plant species. Herbarium specimens are also records of past seasonal events such as when wildflowers bloomed, and when trees leafed out in the spring and dropped their leaves in fall. The information stored in herbaria can help us understand past environmental changes, and also to predict and prepare for future change. This project will allow six members of the Hudson Valley Environmental Monitoring and Management Alliance (EMMA) to digitize their collections. Making the images and label information available online to anyone in the world will immeasurably increase the research and societal value of the EMMA herbaria. The images and information will help the Alliance address urgent threats to ecosystem health in the Hudson Valley, including climate change, invasive species, habitat loss and fragmentation, and deer overabundance. The EMMA herbarium information will also contribute to numerous other projects with scopes beyond the Hudson Valley.
+The EMMA herbaria participating in this project are the Louis Calder Center of Fordham University, the Highstead Arboretum, the E.N. Huyck Preserve, the Mohonk Preserve, Pace University, and Vassar College. Together, they will partner with the existing New England Vascular Plant Network (NEVP). Approximately 22,250 specimens will be digitized, of which around 13,550 are from New York State. This project will provide training opportunities for undergraduate students at Pace and Vassar, who will digitize specimens from those herbaria onsite. A travelling team will carry out most of the digitization work at the other four herbaria. This will increase the NEVP?s New York specimens by 27%. Images and data will be made available through the Consortium of Northeastern Herbaria portal and through iDigBio.org. Along with the herbarium data, site-specific weather and phenology data will be available to researchers through the Forest Ecosystems Monitoring Cooperative platform and the EMMA website. Phenology data will also be available through the USA-National Phenology Network.
+''Project Sponsor'': [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001321 Vassar College (NSF Award #2001321)]
+''Principal Investigators'': [mailto:schlessman@vassar.edu Mark Schlessman] (PI), Keri VanCamp, Nicole Scalessa (co-PIs)

Mobilizing New England Vascular Plant Specimen Data: Difference between revisions

Mobilizing New England Vascular Plant Specimen Data (view source)

Revision as of 13:22, 10 September 2020

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