Managing Natural History Collections Data for Global Discoverability: Difference between revisions

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Managing Natural History Collections Data for Global Discoverability (view source)

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===About===
===About===


'''Instructors (iDigBio):''' Katja Seltmann, Amber Budden, Edward Gilbert, Nico Franz, Greg Riccardi, Deborah Paul, Joanna McCaffrey, Kevin Love, Anne Thessen
'''Instructors (iDigBio):''' Katja Seltmann, Amber Budden, Edward Gilbert, Nico Franz, Greg Riccardi, Deborah Paul, Joanna McCaffrey, Kevin Love, Anne Thessen, David Bloom


'''Skill Level:''' We are focusing our efforts in this workshop on beginners.
'''Skill Level:''' We are focusing our efforts in this workshop on beginners.
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|-
|-
|2:35-2:45
|2:35-2:45
|[http://www.idigbio.org/sites/default/files/workshop-presentations/managing-nhc-data/02_ReviewTools.ppt Review Tools for Data Cleaning, Data Manipulation, and Visualization] (and Lessons)
|[https://www.idigbio.org/sites/default/files/workshop-presentations/managing-nhc-data/02_ReviewTools.ppt Review Tools for Data Cleaning, Data Manipulation, and Visualization] (and Lessons)
:Spreadsheets, Kurator, GPS Visualizer, GEOLOcate, CoGE, Google Maps, CartoDB, Google Fusion Tables, Notepad ++, Open Refine, BioVel, Access,(others), iDigBio recordset data cleaning, iPlant TNRS, RegEx
:Spreadsheets, Kurator, GPS Visualizer, GEOLOcate, CoGE, Google Maps, CartoDB, Google Fusion Tables, Notepad ++, Open Refine, BioVel, Access,(others), iDigBio recordset data cleaning, iPlant TNRS, RegEx
:Where do they fit in your workflow?
:Where do they fit in your workflow?
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|-
|-
|2:45-2:50
|2:45-2:50
|[http://www.idigbio.org/sites/default/files/workshop-presentations/managing-nhc-data/03_DataCleaningWorkflows145PM-Wednesday.ppt Data Cleaning]
|[https://www.idigbio.org/sites/default/files/workshop-presentations/managing-nhc-data/03_DataCleaningWorkflows145PM-Wednesday.ppt Data Cleaning]
:where, when and how does it happen?, what kind of feedback to expect
:where, when and how does it happen?, what kind of feedback to expect
:types of common errors and omissions, best practices strategies, feedback and annotation, error tracking, automation, policies and protocols  
:types of common errors and omissions, best practices strategies, feedback and annotation, error tracking, automation, policies and protocols  
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:Open Refine, part I (facets, clustering)
:Open Refine, part I (facets, clustering)
:https://idigbio.github.io/open-refine/00-getting-started.html
:https://idigbio.github.io/open-refine/00-getting-started.html
:https://wiki.biovel.eu/display/doc/Installing+and+running+DR+Workflow+on+Taverna+Workbench#InstallingandrunningDRWorkflowonTavernaWorkbench-InstallingGoogleRefine
:http://multimedia.journalism.berkeley.edu/tutorials/google-refine-export-json/
:http://multimedia.journalism.berkeley.edu/tutorials/google-refine-export-json/
|Deb Paul
|Deb Paul
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!colspan="3"| Course Overview - Day 3 - Thursday September 17th
!colspan="3"| Course Overview - Day 3 - Thursday September 17th
|-
|-
|8:30-8:45
|8:30-9:00
|Discussion of Material Covered so far, Overview of Day 3, Set up breakout groups
|Discussion of Material Covered so far, Overview of Day 3, Set up breakout groups
|Katja Seltmann
|Katja Seltmann
|-
|8:45 - 9:00
|Feedback from iDigBio as part of the Data Life Cycle
:[https://www.idigbio.org/content/improving-data-quality-idigbio-recordset-data-cleaning-method-tools-and-data-flags Webinar coming up - Improving Data Quality: iDigBio Recordset data cleaning method, tools, and data flags] October 23th, 2015
|Kevin Love, Katja Seltmann and Deb Paul
|-
|-
|9:00-10:00
|9:00-10:00
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|-
|-
|1:00-1:45
|1:00-1:45
|iDigBio Portal Exercise
|Feedback from iDigBio as part of the Data Life Cycle and an iDigBio Portal Exercise
:[[Media:Recordset-cleaning.pdf| iDigBio Data Management and Recordset Data Quality]]
:[https://www.idigbio.org/content/improving-data-quality-idigbio-recordset-data-cleaning-method-tools-and-data-flags Webinar coming up - Improving Data Quality: iDigBio Recordset data cleaning method, tools, and data flags] October 23th, 2015
:Using the iDigBio Portal and integrated research tools (PhyloJive, LifeMapper)
:Using the iDigBio Portal and integrated research tools (PhyloJive, LifeMapper)
:https://goo.gl/gyRwx7
:https://goo.gl/gyRwx7
::
:http://idigbio.github.io/spreadsheet-skills/09-iDigBio-portal.html
|Katja Seltmann
|Kevin Love, Katja Seltmann and Deb Paul
|-
|-
|1:45-2:05
|1:45-2:05
|Copyright / Intellectual Property
|[https://www.idigbio.org/sites/default/files/workshop-presentations/managing-nhc-data/Law%26Ethics_DataDiscovery_iDigBio.pptx Copyright / Intellectual Property]
:VertNet [http://vertnet.org/resources/datalicensingguide.html Guide to Copyright and Licenses for Dataset Publication]
:VertNet [http://vertnet.org/resources/datalicensingguide.html Guide to Copyright and Licenses for Dataset Publication]
::[http://vertnet.org/resources/norms.html VertNet Norms]
:[https://www.idigbio.org/content/idigbio-terms-use-policy iDigBio Terms of Use and Citation]
|David Bloom, Jonathan Rees, Greg Riccardi
|David Bloom, Jonathan Rees, Greg Riccardi
|-
|-
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| style="background-color: #eee;" |
| style="background-color: #eee;" |
|-
|-
|3:20-4:45
|3:20-5:00
|Second round of break-out groups
|Second round of break-out groups
:DWC-A publishing Exercise (or DEMO): using IPT instance OR
:DWC-A publishing Exercise (or DEMO): using IPT instance
::[https://www.idigbio.org/sites/default/files/workshop-presentations/managing-nhc-data/sample-data/sampleoccurrence_dupfixed.txt Sample Dataset]
::your email and "password"
:::http://iptworkshop.idigbio.org/ (your email prefix)
:Symbiota DwC-A mapping and publishing exercise,  
:Symbiota DwC-A mapping and publishing exercise,  
:others
:others
|Edward Gilbert
|Edward Gilbert
|-
|-
|4:45-5:30
|5:00 -5:30
|Closing topics
|Closing topics
:a greater network, the global landscape, next steps
:What are your next steps for moving forward
:review Data Life Cycle we’ve walked through
:guided discussion, survey, and thanks!, ...
:guided discussion, survey, and thanks!, ...
|Katja Seltmann & Nico Franz, all
|Katja Seltmann & all
|-
|-
|}
|}
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==Workshop Recordings==
==Workshop Recordings==
====Day 1====
====Day 1====
*8:30am-10:15m
*8:30am-10:15m http://idigbio.adobeconnect.com/p1w43drdjqp/
*10:45am-11:00am
*1:00pm-2pm http://idigbio.adobeconnect.com/p2jibddghos/
*11:15am-12pm
*3:30-5:30pm http://idigbio.adobeconnect.com/p3rgo6o79wk/
*1:00pm-2:30pm
*3:00-5:00pm


====Day 2 ====
====Day 2 ====
*1:00pm-2:30pm
*2:00pm-4pm http://idigbio.adobeconnect.com/p88qwbfsh33/
*3:00-5:00pm
*4-5:30pm http://idigbio.adobeconnect.com/p6956srj6iu/


====Day 3 ====
====Day 3 ====
*8:30am-10:15am
*10:35am-12:00pm http://idigbio.adobeconnect.com/p38bkyk8uge/
*10:45am-11:00am
*1:00pm-3:30pm http://idigbio.adobeconnect.com/p4fkezirk1j/
*11:15am-12pm
*3:30-5:00pm http://idigbio.adobeconnect.com/p8slidpxlc7/
*1:00pm-3:30pm
*3:30-5:00pm


==Resources and Links==
==Resources and Links==
Kevinlove
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