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===Phenology Deep Learning Workshop=== | ===Phenology Deep Learning Workshop=== | ||
* [https://docs.google.com/document/d/1iHwuw_UREcvxh5Fh0C-UeefkqOClDOs0Q3LBpEDtPXw/edit?usp=sharing Agenda] | * [https://docs.google.com/document/d/1iHwuw_UREcvxh5Fh0C-UeefkqOClDOs0Q3LBpEDtPXw/edit?usp=sharing Agenda] | ||
===Presentations=== | |||
* [[Media:Pl@ntNet_at_iDigBio_phenology_(1).pdf|Alexis Joly]] | |||
* Brian Stucky | |||
* [[Media:White.IDigBio_DL_workshop.pdf|Alex White]] | |||
* Nicky Nicholson | |||
* [[Media:Mazer.iDigBio-Gainesville-011719.compressed.pdf|Susan Mazer]] | |||
* [[Media:Pearson.CAP_DeepLearningWorkshop2.pdf|Katie Pearson]] | |||
* [[Media:Sweeney.Pheno_in_the_Machine_Sweeney_2019.pdf|Patrick Sweeney]] | |||
* [[Media:ImageProcessingPipelineforiDigBioimages.pdf|Renato Figueiredo]] | |||
==Notes documents - Thursday== | ==Notes documents - Thursday== | ||
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* [https://docs.google.com/document/d/1Be6uP0pfHtO8RIvpqN_Ypwwnleuk2xpOHGEJL3Z-LWM/edit Summary Round 1] | * [https://docs.google.com/document/d/1Be6uP0pfHtO8RIvpqN_Ypwwnleuk2xpOHGEJL3Z-LWM/edit Summary Round 1] | ||
'''Round Two Assignment: ''' | |||
'''From round one, several major topics cut across most of your responses, including standards, scoring, machine learning, Computational power/cyberinfrastructure. Self-select into four groups and outline where we are and where we want to go for these components.''' | |||
* [https://docs.google.com/document/d/1B0TObkmaP0gvbOloS1qZHHcsKWQNDDnTS3zQl1VhY8s/edit?usp=sharing Group 5 - Standards] | * [https://docs.google.com/document/d/1B0TObkmaP0gvbOloS1qZHHcsKWQNDDnTS3zQl1VhY8s/edit?usp=sharing Group 5 - Standards] | ||
* [https://docs.google.com/document/d/1IHgvPDxiVrbyo1bslVZO-jZ-SJPf9RAkfVsBl9ZDgWs/edit?usp=sharing Group 6 - Scoring] | * [https://docs.google.com/document/d/1IHgvPDxiVrbyo1bslVZO-jZ-SJPf9RAkfVsBl9ZDgWs/edit?usp=sharing Group 6 - Scoring] | ||
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==Notes documents - Friday== | ==Notes documents - Friday== | ||
'''Round Three Assignment: From our discussions on Day 1, record what you recognize as priority issues that need to be addressed first. Think of this in terms of a project. If funds were available to begin a project, what are the critical outcomes the project should strive to achieve?''' | |||
* [https://docs.google.com/document/d/1MfXrXEMmgkgOH2G7Io7Z6kxx1wIpEiZrXV44ive3Lj8/edit?usp=sharing Burning Issues for Friday] | * [https://docs.google.com/document/d/1MfXrXEMmgkgOH2G7Io7Z6kxx1wIpEiZrXV44ive3Lj8/edit?usp=sharing Burning Issues for Friday] | ||
* [https://docs.google.com/document/d/12FG8KRmVO9J3JrOKtCXPgAWZJwGkI0eq6jBYrIVCqg0/edit?usp=sharing Group 9] | |||
* [https://docs.google.com/document/d/1eiQ_ewMoN0CsnR-hWSDOHa83yZD1MI-7WSJKRh-m78c/edit?usp=sharing Group 10] | '''Round Four Assignment: Continuing with our project development scenario, self-select the components you are most interested in and in small groups, begin to add implementation steps to our project, thinking as concretely as possible and making a strong and convincing case for the components you envision.''' | ||
* [https://docs.google.com/document/d/1AI1ox_xrzF_vckcyAXijZ_VBIg3q7Kz0740Xuc3crMA/edit?usp=sharing Group 11] | * [https://docs.google.com/document/d/12FG8KRmVO9J3JrOKtCXPgAWZJwGkI0eq6jBYrIVCqg0/edit?usp=sharing Group 9 - Questions] | ||
* [https://docs.google.com/document/d/1eiQ_ewMoN0CsnR-hWSDOHa83yZD1MI-7WSJKRh-m78c/edit?usp=sharing Group 10 - PPO] | |||
* [https://docs.google.com/document/d/1AI1ox_xrzF_vckcyAXijZ_VBIg3q7Kz0740Xuc3crMA/edit?usp=sharing Group 11 - Adapting tools] | |||
'''Paper Design''' | |||
* [https://docs.google.com/document/d/1M3OIBDUXIYcsHdfKXT1gzTkKCEg2qSqOw1AIt2WpezA/edit?usp=sharing Outline] | |||
* [https://docs.google.com/document/d/1_yBdP1kqCAtOVQggl3fTCwZpXO3eZqidQIwG_KjcfUs/edit?usp=sharing Group 12] | * [https://docs.google.com/document/d/1_yBdP1kqCAtOVQggl3fTCwZpXO3eZqidQIwG_KjcfUs/edit?usp=sharing Group 12] | ||
* [https://docs.google.com/document/d/1JK9Y3PohiewRG_Cm7dAAqfsA_OTaGwbwfz58QwMn5io/edit?usp=sharing Group 13] | * [https://docs.google.com/document/d/1JK9Y3PohiewRG_Cm7dAAqfsA_OTaGwbwfz58QwMn5io/edit?usp=sharing Group 13] | ||
* [https://docs.google.com/document/d/1ALtkqTx1DqRfa7sEVeJYtVTn7_eSLidBbON_UjzQgzc/edit?usp=sharing Group 14] | * [https://docs.google.com/document/d/1ALtkqTx1DqRfa7sEVeJYtVTn7_eSLidBbON_UjzQgzc/edit?usp=sharing Group 14] | ||
* [https://docs.google.com/document/d/1c8c-uup27sXDwBuvXutPr2J7HMf9eThl7Q4qPjeCNL0/edit?usp=sharing | |||
* [https://docs.google.com/document/d/1c8c-uup27sXDwBuvXutPr2J7HMf9eThl7Q4qPjeCNL0/edit?usp=sharing Section 4] | |||
* [https://docs.google.com/document/d/1fw8onMSL8kZqlUsnWgsUxb6VSj_M3vVRnOZH86rnr84/edit?usp=sharing Section 5] | |||
==Workshop Participants== | |||
Susan Mazer, University of California, Santa Barbara</p> | |||
<p>Brian Stucky, Florida Museum of Natural History, University of Florida</p> | |||
<p>Katelin "Katie" Pearson, California Polytechnic University, San Luis Obispo</p> | |||
<p>Alex White, Department of Botany / Data Science Lab, Smithsonian Institution</p> | |||
<p>Sylvia Orli, Smithsonian</p> | |||
<p>Patrick Sweeney, Yale Peabody Museum of Natural History</p> | |||
<p>Emily Meineke, Harvard University Herbaria</p> | |||
<p>Charles Davis, Harvard University Herbaria</p> | |||
<p>Ellen Denny, USA-NPN/Univ of AZ</p> | |||
<p>Laura Brenskelle, University of Florida</p> | |||
<p>Nadya Williams, University of California, San Diego</p> | |||
<p>Libby Ellwood, Natural History Museum of Los Angeles</p> | |||
<p>Pierre Bonnet, CIRAD</p> | |||
<p>Alexis Joly, Inria</p> | |||
<p>Hervé Goëau, CIRAD</p> | |||
<p>Titouan Lorieul, Inria / University of Montpellier</p> | |||
<p>Nicky Nicolson, Royal Botanic Gardens, Kew and Dept of Computer Science, Brunel University, London</p> | |||
<p>Katja Seltmann, UC Santa Barbara</p> | |||
<p>Isaac Park, University of California Santa Barbara</p> | |||
<p>Mason Heberling, Carnegie Museum of Natural History</p> | |||
<p>Myla Aronson, Rutgers University</p> | |||
<p>Deborah Paul, Florida State University</p> | |||
<p>Renato Figueiredo, University of Florida</p> | |||
<p>Annika Smith, Florida Museum of Natural History</p> | |||
<p>Pam Soltis, Florida Museum of Natural History</p> | |||
<p>Gil Nelson, Florida Museum of Natural History</p> | |||