Coding Phenological Data from Herbarium Sheets
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Logistics
- Workshop Logistics Document
- UC Berkeley Parking Information
- Hotel information
- Mass Transit information
- Original workshop announcement
Workshop Materials
Agenda, Day 1
Saturday, March 12, 2016
| Day One | |||
|---|---|---|---|
| Time | Topic | Presenter(s)/Leader(s) | |
| 7:00-8:00 a.m. | Breakfast at University and Jepson Herbaria | ||
| 8:00-8:10 a.m. | Welcome | Pam Soltis iDigBio/University of Florida | |
| 8:10 - 8:20 a.m. | Background/Orientation to workshop Workshop goals and products |
Jenn Yost Cal Poly | |
| 8:20-9:40 a.m. | Lightning Introductions (1 slide per person) | ||
| 9:40-9:55 a.m. | Break | ||
| 9:55-10:50 | Discussion of Survey Results (provided in packet) •Analysis of data gaps •Draft priorities in groups •Flora of North America |
Jenn Yost, moderator | |
| 10:50-11:15 a.m. | iDigBio introduction How data moves from database to aggregators, to iDigBio. |
Gil Nelson iDigBio, Florida State University | |
| 10:15-11:35 11:15-11:35 11:35-11:55 |
Data standards community •Darwin Core •Apple Core |
John Wieczorek James Macklin | |
| 12:00-1:15 p.m. | Lunch and Tour the University and Jepson Herbaria | Brent Mishler is giving a 20 minute tour | |
| 1:15-1:35 p.m. | Data standards community •Plant Phenology Ontology |
Ramona Walls | |
| 1:35-2:00 p.m. | NEVP and Symbiota | Patrick Sweeney, Yale Ed Gilbert, Symbiota | |
| 2:00-2:45 p.m. | Plenary Discussion | Jenn and Gil, moderate | |
| 2:45-3:00 p.m. | Break | ||
| 3:00-4:00 p.m. | Breakout Session #1
Use specimens to assess and draft scoring schema, and rank according to priorities.Work in Google folder. |
||
| 4:00-5:00 p.m. | Group Discussion Priority ranking Metrics to score Vocabulary Propose fields/define fields Scoring from images v. specimens Daily Wrap-up/Q&A Plans for Day 2 Create groups/topics for tomorrow |
||
| Dinner on Your Own Recommended gathering place: Jupiter (http://www.jupiterbeer.com/) | |||
Agenda, Day 2
Sunday, March 13, 2016
| Day Two | ||
|---|---|---|
| Time | Topic | Presenter(s)/Leader(s) |
| 7:00-8:00 a.m. | Breakfast at University and Jepson Herbaria | |
| 8:00-9:00 a.m. | Discussion from Day 1 and steps forward Form groups or make new groups. |
Gil Nelson, Moderator |
| 9:00-11:00 a.m. | Breakout Session #2 Groups formed around taxonomic groups: Angiosperms, grasses/sedges/rushes, Gymnosperms, and others formed on day 1. Vegetative scoring from sheets: Is this worth it? Draft of pros/cons of using specimens for phenology research. Draft methods recorded on how to score that group, what to prioritize. Draft issues regarding phenology from specimens. |
|
| 11:00-12:00 p.m. | Next steps forward with DarwinCore - Set our DwC working group Check in: Do our draft methods require revision? How do our draft terms fit with current DwC? |
John Wieczorek James Macklin |
| 12:00-1:00 p.m. | Lunch | |
| 1:00-2:00 p.m. | Next steps forward for databases (Symbiota, Specify, iDigBio) |
|
| 2:00-3:00 p.m. | Mapping to Field Data - work in groups (using Google sheet) |
|
| 3:00-3:15 p.m. | Break | |
| 3:15-4:15 p.m. | Finalize drafts of methods, utility of specimens for phenology research |
|
| 4:15-5:00 p.m. | Summary of next steps | |
| Dinner on Your Own | ||
| Day 1: First break out groups | |||||
|---|---|---|---|---|---|
| Group 1 | Group 2 | Group 3 | Group 4 | Group 5 | |
| Database | Ed Gilbert | David Baxter | Ben Anhalt Greg Riccardi |
Gil Nelson | Ramona Walls Michael Denslow |
| Standards | Stanley Blum | Brian Stucky | James Macklin Ashley Morris |
Katja Seltman | Katie Stanley John Wieczorek |
| International | Kjell Bolmgren | Marie Keatley | Tim Sparks | Constantin Zohner | |
| Field Data | Alycia Crall | Ellen Denny | Kathy Gerst | Susan Mazer | Jill Goodwin |
| Herbaria | Ellen Dean Charlie Willis Staci Markos |
Natalie Rossington Richard Carter |
Amanda Gallinat Debra Trock |
Jenn Yost Patrick Sweeney Mare Nazaire |
Brent Mishler Libby Ellwood |