4th Annual Digital Data Conference, Indiana University: Difference between revisions
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|colspan=" | |colspan="4" style="text-align: center; background-color:#FFF8DC;"| '''Day One - Block One''' | ||
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|colspan=" | |colspan="4" style="text-align: center; background-color:#FFF8DC;"| '''9:00AM - 12:00PM EDT / 1:00PM - 4:00PM UTC''' | ||
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| colspan="1" style="background-color:#FFF8DC; text-align:left" | '''Room 2''' | | colspan="1" style="background-color:#FFF8DC; text-align:left" | '''Room 2''' | ||
| colspan="1" style="background-color:#FFF8DC; text-align:left;" | '''Room 3''' | | colspan="1" style="background-color:#FFF8DC; text-align:left;" | '''Room 3''' | ||
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| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|'''Welcome - Michael McRobbie''', President of Indiana University <br>'''Logistics - Gary Motz''', Indiana University, Indiana Geological and Water Survey<br> | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|'''Welcome - Michael McRobbie''', President of Indiana University <br>'''Logistics - Gary Motz''', Indiana University, Indiana Geological and Water Survey<br> | ||
'''Conference Framing - Jill Goodwin''', iDigBio, University of Florida<br> | '''Conference Framing - Jill Goodwin''', iDigBio, University of Florida<br> | ||
| colspan="1" style="vertical-align:top;"| | | colspan="1" style="vertical-align:top;"| | ||
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| colspan="1" style="vertical-align:top;background-color:#FFF8DC;"|9:30 | | colspan="1" style="vertical-align:top;background-color:#FFF8DC;"|9:30 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|'''Plenary Speaker - Lauren Sallan''', Martin Meyerson Assistant Professor in Interdisciplinary Studies, University of Pennsylvania, 2019 TED Senior Fellow | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|'''Plenary Speaker - Lauren Sallan''', Martin Meyerson Assistant Professor in Interdisciplinary Studies, University of Pennsylvania, 2019 TED Senior Fellow | ||
| colspan="1" style="vertical-align:top;"| | | colspan="1" style="vertical-align:top;"| | ||
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'''Plenary Speaker - Joseph Cook''', Professor & Curator, Division of Mammals, The University of New Mexico | '''Plenary Speaker - Joseph Cook''', Professor & Curator, Division of Mammals, The University of New Mexico | ||
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| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|10:30-11:00 | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|10:30-11:00 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|Break - Rooms open for discussion | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|Break - Rooms open for discussion | ||
| colspan="1" style="vertical-align:top;"| | | colspan="1" style="vertical-align:top;"| | ||
| colspan="1" style="vertical-align:top;"| | | colspan="1" style="vertical-align:top;"| | ||
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| colspan=" | | colspan="4" style="text-align:center; vertical-align:top; background-color:#FFF8DC;"|<b>'''Concurrent Sessions 1-3 11:00 a.m. - 12:00 p.m. | ||
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| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| | |||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|’’Session 1 – Harnessing the Data Revolution’’ | |||
| colspan="1" style="vertical-align:top;"| ‘’’Session 2 - Part I - The role and relevance of “Big Data” in biodiversity research’’’ | |||
| colspan="1" style="vertical-align:top;"| ‘’Session 3 - Pipelines that integrate digitization, data use, and research’’ | |||
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| colspan="1" style="vertical-align:top;"|11:00 | | colspan="1" style="vertical-align:top;"|11:00 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| Concurrent Session 1A; | ||
| colspan="1" style="vertical-align:top;"| | Developing Data infrastructures for environmental archaeology, palaeoecology and conservation palaeobiology <br> | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| | Philip Buckland, Umea University; Francesca Pilotto <br> | ||
| colspan="1" style="vertical-align:top;"| Concurrent Session 2A; | |||
A joint effort for the quality control of herbarium specimen data <br> | |||
Ashton Welcome, South African National Biodiversity Institute (SANBI); | |||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| Concurrent Session 3A <br> | |||
The step beyond: from scientific work environment to reliable and effective conservation genomic tools <br> | |||
Jutta Buschbom, Statistical Genetics | |||
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| colspan="1" style="vertical-align:top;"|11:20 | | colspan="1" style="vertical-align:top;"|11:20 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| Concurrent Session 1B <br> | ||
| colspan="1" style="vertical-align:top;"| | Reliable data use in R <br> | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| | Jorrit Poelen, Ronin Institute; Carl Boettiger, UC Berkeley | ||
| colspan="1" style="vertical-align:top;"| ’’Session 2 - Part II - Systematics and the use of digital specimen data’’ <br> | |||
Concurrent Session 2B <br> | |||
Rodents from Eastern Amazon, Brazil: specimens and digital data <br> | |||
Alexandra M. R. Bezerra; Museu Paraense Emílio Goeldi | |||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| Concurrent Session 3B <br> | |||
Developing the digitization practices of parasitic arthropod specimens from a university collection <br> | |||
Jenna O'del, University of New Hampshire; Isaac A. Bergfalk, UNH; Holly A. Hoag, UNH; István Mikó, UNH | |||
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| colspan="1" style="vertical-align:top;"|11:40 | | colspan="1" style="vertical-align:top;"|11:40 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| Concurrent Session 1C <br> | |||
Increasing the usefulness of crowd-sourced citizen science data to monitor and understand biodiversity <br> | |||
Giovanni Rapacciuolo, California Academy of Sciences; Alison Young, California Academy of Sciences; Michael Esgro, California, Ocean Protection Council; Sara Worden, California Department of Fish and Wildlife; Rebecca Johnson, California Academy of Sciences | |||
| colspan="1" style="vertical-align:top;"| ‘’Session 2 - Part III - Ongoing research projects that utilize digital data’’ <br> | |||
Concurrent Session 2C <br> | |||
Florida plants and climate change: Scripts and pitfalls for utilizing digitized data in course-based undergraduate research <br> | |||
Michelle Gaynor, University of Florida; Douglas E. Soltis, Department of Biology and Florida Museum of Natural History, University of Florida; Pamela S. Soltis, Florida Museum of Natural History, University of Florida | |||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| | ||
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{| class="wikitable" style="background-color:#FFF8DC;" | {| class="wikitable" style="background-color:#FFF8DC;" | ||
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|colspan=" | |colspan="4" style="text-align: center; background-color:#FFF8DC;"| '''Day One - Block Two''' | ||
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|colspan=" | |colspan="4" style="text-align: center; background-color:#FFF8DC;"| ‘''1:00PM - 4:00PM EDT / 5:00PM – 9:00PM UTC ''’ | ||
'' | |||
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|colspan="5" style="text-align:center; vertical-align:top; background-color:#FFF8DC;"|'''Discussion Sessions 1&2''' | |colspan="5" style="text-align:center; vertical-align:top; background-color:#FFF8DC;"|'''Discussion Sessions 1&2 <br> Theme: Gaps and deficiencies in currently available digital data that hinder effective use''' | ||
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| colspan="1" style="background-color:#FFF8DC; text-align:left;" | '''Time''' | | colspan="1" style="background-color:#FFF8DC; text-align:left;" | '''Time''' | ||
| colspan=" | | colspan="3" style="background-color:#FFF8DC; text-align:left;" | '''Room 1''' | ||
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| colspan="1" style="vertical-align:top; text-align: left;background-color:#FFF8DC;"|1:00 - 2: | | colspan="1" style="vertical-align:top; text-align: left;background-color:#FFF8DC;"|1:00 - 2:15 | ||
| colspan=" | | colspan="3" style="vertical-align:top; background-color:#FFF8DC;"|Discussion Session 1 <br> Taxonomically intelligent biodiversity data: Taking stock of our progress and next steps to scale up implementation <br> Beckett Sterner, Arizona State University; Nate Upham, Arizona State University; Steffi Ickert-Bond, University of Alaska Fairbanks; Jeff Gerbracht, eBird; Atriya Sen, Arizona State University; Nico Franz, Arizona State University | ||
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| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|2: | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|2:15 – 2:45 | ||
| colspan=" | | colspan="3" style="vertical-align:top; background-color:#FFF8DC;"|Break - Rooms open for discussion | ||
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| colspan="1" style="vertical-align:top;"|2: | | colspan="1" style="vertical-align:top;"|2:45 – 3:30 | ||
| colspan=" | | colspan="3" style="vertical-align:top; background-color:#FFF8DC;"|Discussion Session 2 | ||
<br> Reliable dataset identifiers are essential building blocks for reproducible research <br> | |||
Jorrit Poelen, Ronin Institute; Michael Elliott, Advanced Computing and Information Systems Laboratory (ACIS) Department of Electrical and Computer Engineering, University of Florida; Jose Fortes, Advanced Computing and Information Systems Laboratory (ACIS) Department of Electrical and Computer Engineering, University of Florida, Gainesville, FL | |||
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{| class="wikitable" style="background-color:#FFF8DC;" | {| class="wikitable" style="background-color:#FFF8DC;" | ||
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|colspan=" | |colspan="4" style="text-align: center; background-color:#FFF8DC;"| '''Day One - Block Three''' | ||
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|colspan=" | |colspan="4" style="text-align: center; background-color:#FFF8DC;"| '''6:00PM - 9:00PM EDT / 10:00 PM - 1:00 AM ''' | ||
'' | '' | ||
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|colspan=" | |colspan="4" style="text-align:center; vertical-align:top; background-color:#FFF8DC;"|'''Evening Reception''' | ||
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| colspan="1" style="background-color:#FFF8DC; text-align:left" | '''Room 2''' | | colspan="1" style="background-color:#FFF8DC; text-align:left" | '''Room 2''' | ||
| colspan="1" style="background-color:#FFF8DC; text-align:left;" | '''Room 3''' | | colspan="1" style="background-color:#FFF8DC; text-align:left;" | '''Room 3''' | ||
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| colspan="1" style="vertical-align:top; text-align: left;background-color:#FFF8DC;"|6:00 - 6:20 | | colspan="1" style="vertical-align:top; text-align: left;background-color:#FFF8DC;"|6:00 - 6:20 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|Welcome <br> Description of Evening | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|Welcome <br> Description of Evening | ||
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| colspan="1" style="vertical-align:top;"| | | colspan="1" style="vertical-align:top;"| | ||
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| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|6:20 - 6:50 | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|6:20 - 6:50 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"| | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|Irene Moon | ||
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| colspan="1" style="vertical-align:top;"|6:50 - 7:30 | | colspan="1" style="vertical-align:top;"|6:50 - 7:30 | ||
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| colspan="1" style="vertical-align:top;"|Natural History Show and Tell and Happy Hour <br> Theme #2 | | colspan="1" style="vertical-align:top;"|Natural History Show and Tell and Happy Hour <br> Theme #2 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|Natural History Show and Tell and Happy Hour <br> Theme #3 | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|Natural History Show and Tell and Happy Hour <br> Theme #3 | ||
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| colspan="1" style="vertical-align:top; text-align: left;background-color:#FFF8DC;"|7:30 - 8:00 | | colspan="1" style="vertical-align:top; text-align: left;background-color:#FFF8DC;"|7:30 - 8:00 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|Break - Rooms open for discussion | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|Break - Rooms open for discussion | ||
| colspan="1" style="vertical-align:top;"| | | colspan="1" style="vertical-align:top;"| | ||
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| colspan="1" style="vertical-align:top; text-align: left;background-color:#FFF8DC;"| | | colspan="1" style="vertical-align:top; text-align: left;background-color:#FFF8DC;"|8:00 – 9:00 | ||
| colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|IU Virtual Collection Tour | | colspan="1" style="vertical-align:top; background-color:#FFF8DC;"|IU Virtual Collection Tour | ||
| colspan="1" style="vertical-align:top;"| | | colspan="1" style="vertical-align:top;"| | ||
| colspan="1" style="vertical-align:top;"| | | colspan="1" style="vertical-align:top;"| |
Revision as of 09:18, 4 May 2020
Social Media
Twitter: #digidata, @idigbio
Conference Resources
Conference Registration
For those who would like to support the sustainability of in-person Digital Data Conferences, registration fees are $100.00 for professionals, $50.00 for students. Those who wish not to make a financial contribution to the conference may select the free option.
Registration is open - Click here to register through Eventbrite.
Final registration deadline: May 22.
Abstract Submissions
Options for submission include: discussion, oral, or poster presentations.
You must register to submit an abstract. The abstract submission link will be sent to you in your registration confirmation email.
Abstract submission deadlines: 24 April 2020
The conference will be structured to allow live presentations among different time zones. Recording of presentations are additionally being requested to be posted on the wiki to ensure their availability to any timezone.
Posters
All posters will be electronic and linked to this wiki page. There will not be a live session for posters. We are requesting that poster presenters provide a recorded description with their poster presentation.
Oral Presentations
Oral presentations should be 10 minutes long. Each oral presentation will be presented live and pre-recorded presentations will be posted on the wiki page. In the live sessions an additional 5 minutes will be given for questions.
Click here to view an example
Discussion sessions
Discussion sessions may be up to one hour long. These may begin with a presentation or introduction followed by discussion or may be completely devoted to open discussion.
Draft Agenda - Schedule Subject to Change
Monday, 1 June 2020
Day One - Block One | ||||
9:00AM - 12:00PM EDT / 1:00PM - 4:00PM UTC
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Keynote Session Location: - 9:00 - 9:30 a.m. | ||||
Time | Room 1 | Room 2 | Room 3 | |
9:00 | Welcome - Michael McRobbie, President of Indiana University Logistics - Gary Motz, Indiana University, Indiana Geological and Water Survey Conference Framing - Jill Goodwin, iDigBio, University of Florida |
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9:30 | Plenary Speaker - Lauren Sallan, Martin Meyerson Assistant Professor in Interdisciplinary Studies, University of Pennsylvania, 2019 TED Senior Fellow | |||
10:00 |
Plenary Speaker - Joseph Cook, Professor & Curator, Division of Mammals, The University of New Mexico |
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10:30-11:00 | Break - Rooms open for discussion | |||
Concurrent Sessions 1-3 11:00 a.m. - 12:00 p.m. | ||||
’’Session 1 – Harnessing the Data Revolution’’ | ‘’’Session 2 - Part I - The role and relevance of “Big Data” in biodiversity research’’’ | ‘’Session 3 - Pipelines that integrate digitization, data use, and research’’ | ||
11:00 | Concurrent Session 1A;
Developing Data infrastructures for environmental archaeology, palaeoecology and conservation palaeobiology |
Concurrent Session 2A;
A joint effort for the quality control of herbarium specimen data |
Concurrent Session 3A The step beyond: from scientific work environment to reliable and effective conservation genomic tools | |
11:20 | Concurrent Session 1B Reliable data use in R |
’’Session 2 - Part II - Systematics and the use of digital specimen data’’ Concurrent Session 2B |
Concurrent Session 3B Developing the digitization practices of parasitic arthropod specimens from a university collection | |
11:40 | Concurrent Session 1C Increasing the usefulness of crowd-sourced citizen science data to monitor and understand biodiversity |
‘’Session 2 - Part III - Ongoing research projects that utilize digital data’’ Concurrent Session 2C |
Day One - Block Two | ||||
‘1:00PM - 4:00PM EDT / 5:00PM – 9:00PM UTC ’ | ||||
Discussion Sessions 1&2 Theme: Gaps and deficiencies in currently available digital data that hinder effective use | ||||
Time | Room 1 | |||
1:00 - 2:15 | Discussion Session 1 Taxonomically intelligent biodiversity data: Taking stock of our progress and next steps to scale up implementation Beckett Sterner, Arizona State University; Nate Upham, Arizona State University; Steffi Ickert-Bond, University of Alaska Fairbanks; Jeff Gerbracht, eBird; Atriya Sen, Arizona State University; Nico Franz, Arizona State University | |||
2:15 – 2:45 | Break - Rooms open for discussion | |||
2:45 – 3:30 | Discussion Session 2
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Day One - Block Three | |||
6:00PM - 9:00PM EDT / 10:00 PM - 1:00 AM
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Evening Reception | |||
Time | Room 1 | Room 2 | Room 3 |
6:00 - 6:20 | Welcome Description of Evening |
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6:20 - 6:50 | Irene Moon | ||
6:50 - 7:30 | Natural History Show and Tell and Happy Hour Theme #1 |
Natural History Show and Tell and Happy Hour Theme #2 |
Natural History Show and Tell and Happy Hour Theme #3 |
7:30 - 8:00 | Break - Rooms open for discussion | ||
8:00 – 9:00 | IU Virtual Collection Tour |
Tuesday, 2 June 2020
Day Two - Block One | ||||
6:00AM - 9:00AM PDT / 9:00AM - 12:00PM EDT / 2:00PM - 5:00PM LONDON / 9:00PM - 12:00 AM PERTH | ||||
Web Repository Workshop Facilitators:David Blackburn, Florida Museum of Natural History and Doug Boyer, Duke University | ||||
Time | Room 1 | Room 2 | Room 3 | Room 4 |
9:00 - 10:30 | Web Repository Workshop | |||
10:30-11:00 | Break - Rooms open for discussion | |||
11:00 - 12:00 |
Web Repository Workshop cont. |
Day Two - Block Two | ||||
10:00AM - 1:00PM PDT / 1:00PM - 4:00PM EDT / 6:00PM - 9:00PM LONDON / 1:00AM - 4:00AM PERTH
| ||||
Time | Room 1 | Room 2 | Room 3 | Room 4 |
1:00 - 1:30 | Plenary Speaker - Katie Stanchak, Graduate Student/Postdoctoral Scholar, Department of Biology, University of Washington | |||
1:30 - 2:10 | Plenary Speaker - Michelle LeFebvre, Assistant Curator of Archaeology, Florida Museum of Natural History, University of Florida | |||
Concurrent Sessions 4-7 2:10 - 3:30 p.m. | ||||
2:10 | ||||
2:30 | ||||
2:50 | ||||
3:10 |
Day Two - Block Three | ||||
3:00PM - 6:00PM PDT / 6:00PM - 9:00PM EDT / 11:00PM - 2:00AM LONDON / 6:00AM - 9:00AM PERTH
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Unconference: Biodiversity Science from Perspectives in Other Disciplines Facilitators:Deb Paul, iDigBio, Florida State University; Kimberly Cook and Gary Motz, Indiana University | ||||
Time | Room 1 | Room 2 | Room 3 | Room 4 |
6:00 - 7:30 | Unconference Event | |||
7:30 - 8:00 | Break - Rooms open for discussion | |||
8:00 - 9:00 | Unconference Event cont. |
Wednesday, 3 June 2020
Day Three - Block One | ||||
6:00AM - 9:00AM PDT/ 9:00AM - 12:00PM EDT / 2:00PM - 5:00PM LONDON/ 9:00PM - 12:00 AM PERTH
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Discussion Sessions 3&4 | ||||
Time | Room 1 | Room 2 | Room 3 | Room 4 |
9:00 - 10:00 | Discussion Session 3 | |||
10:00 - 10:30 | Break - Rooms open for discussion | |||
10:30 - 11:30 | Discussion Session 4 |
Day Three - Block Two | ||||
10:00AM - 1:00PM PDT/ 1:00PM - 4:00PM EDT / 6:00PM - 9:00PM LONDON/ 1:00AM - 4:00AM PERTH | ||||
R and the iDigBio API Workshop Facilitators:Erica Krimmel, iDigBio, Florida State University and Ronald Canepa, ACIS Lab, University of Florida
| ||||
Time | Room 1 | Room 2 | Room 3 | Room 4 |
1:00 - 2:30 | R and the iDigBio API Workshop | |||
2:30 -3:00 | Break - Rooms open for discussion | |||
3:00 - 4:30 |
R and the iDigBio API Workshop cont. |
Day Three - Block Three | ||||
3:00PM - 6:00PM PDT / 6:00PM - 9:00PM EDT / 11:00PM - 2:00AM LONDON / 6:00AM - 9:00AM PERTH
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Time | Room 1 | Room 2 | Room 3 | Room 4 |
6:00 - 6:30 | Plenary Speaker - Andrew Miller, Mycologist and Director of the Herbarium/Fungarium, University of Illinois, Illinois Natural History Survey | |||
6:30 - 7:00 | Plenary Speaker - Beth Plale, Science Advisor for Public Access, National Science Foundation; Director, Data to Insight Center of Pervasive Technologies, Luddy School of Informatics, Computing, and Engineering, Indiana University | |||
7:00 - 7:30 | Break - Rooms open for discussion | |||
Concurrent Sessions 8-10 7:30 - 8:30 p.m. | ||||
7:30 | ||||
7:50 | ||||
8:10 |
Remote Poster Session
Title | Authors | |||