TDWG SPNHC 2018 Digitization Presentations

Thematic Collections Networks Presentations

Barber, A., Skema, C., Mancini, M., & Block, T. (2018) Assessing Herbarium Specimen Image Quality with FineFocus. Biodiversity Information Science and Standards 2: e26181. MAM [1] TCN https://doi.org/10.3897/biss.2.26181 [2]

Byrd, C. (2018). Bringing Sternberg Museum Fossils into the 21st Century. Biodiversity Information Science and Standards, 2, e25931. Cretaceous World [3] TCN https://doi.org/10.3897/biss.2.25931 [4]

Hendy, A., & Sessa, J. (2018). Bringing Back the Buzzing of the Bees: Enhancing the Discovery of Fossil Insect Collections with the ePANDDA API. Biodiversity Information Science and Standards, 2, e26496. Fossils Insects of LA PEN/FIC [5] TCN https://doi.org/10.3897/biss.2.26496 [6]

Little, H., Leary, A., Cano, A., & Mansur. A. (2018) Digitizing EPICC Data: Trials and Tribulations in Translating 100 Year Old Data. Biodiversity Information Science and Standards 2: e26222. EPICC [7] TCN https://doi.org/10.3897/biss.2.26222 [8]

Martin, E., Butts, S., Elder, L., Gall, L., Lutz, C., Norris, C., & Utrup, J. (2018) Cretaceous World TCN: Digitizing the Western Interior Seaway at the Yale Peabody Museum. Biodiversity Information Science and Standards 2: e26115. Cretaceous World [3] TCN https://doi.org/10.3897/biss.2.26115 [9]

Motz G, Zimmerman A, Cook K, Bancroft A (2018) Collections Management and High-Throughput Digitization using Distributed Cyberinfrastructure Resources. Biodiversity Information Science and Standards 2: e25643. Paleoniches [10] TCN https://doi.org/10.3897/biss.2.25643 [11]

Walker, L., Krimmel, E., Vendetti, J., & Hendy, A. (2018) Leveraging Collective Experience to Digitize the Fossil Insects of Los Angeles. Biodiversity Information Science and Standards 2: e26385. Fossils Insects of LA PEN/FIC [5] TCN https://doi.org/10.3897/biss.2.26385 [12]

Watkins-Colwell, G., Love, K., Randall, Z., Boyer, D., Winchester, J., Stanley, E., & Blackburn, D. (2018) The Walking Dead: Status Report, Data Workflow and Best Practices of the oVert Thematic Collections Network. Biodiversity Information Science and Standards 2: e26078. oVert [13] TCN https://doi.org/10.3897/biss.2.26078 [14]

Wetter, M. (2018). Documenting the occurrence through space & time of aquatic non-indigenous fish, mollusks, algae, & plants threatening North America's Great Lakes utilizing herbaria & zoological museum specimens. Biodiversity Information Science and Standards, 2, e24930. GLI TCN https://doi.org/10.3897/biss.2.2493 [15]0

iDigBio Presentations

Belbin, L., Chapman, A., Wieczorek, J., Zermoglio, P., Thompson, A., & Morris, P. (2018) Data Quality Task Group 2: Tests and Assertions. Biodiversity Information Science and Standards 2: e25608. https://doi.org/10.3897/biss.2.25608 [16]

Collins, M., Tarvin, R., Kandziora, M., Dahdul, W., & Paul, D. (2018). Phenomap-Challenges and Successes in Bringing Together Multiple Data Projects to Build New Visualizations of Phenotypic Information and Specimen Records. Biodiversity Information Science and Standards, 2, e25698. https://doi.org/10.3897/biss.2.25698 [17]

Collins, M., Yeole, G., Frandsen, P., Dikow, R., Orli, S., & Figueiredo, R. (2018). A Pipeline for Deep Learning with Specimen Images in iDigBio-Applying and Generalizing an Examination of Mercury Use in Preparing Herbarium Specimens. Biodiversity Information Science and Standards, 2, e25699. https://doi.org/10.3897/biss.2.25699 [18]

Moran, S., MacFadden, B., & Barboza, M. (2018). Increasing the Research Value of Digitized Fossil Museum Specimens via Integrated Stable Isotope Data. Biodiversity Information Science and Standards, 2, e26567. https://doi.org/10.3897/biss.2.26567 [19]

Nelson, G., & Ellis, S. (2018). The Impact of Digitization and Digital Data Mobilization on Biodiversity Research and Outreach. Biodiversity Information Science and Standards, 2, e28470. https://doi.org/10.3897/biss.2.28470 [20]

Nelson, G., Phillips, M., Monfils, A., MacFadden, B., & Hogue, G. (2018). Completing the Data Pipeline: Collections Data Use in Research, Education and Outreach. Biodiversity Information Science and Standards, 2, e26522. https://doi.org/10.3897/biss.2.26522 [21]

Paul, D., & Fisher, N. (2018) Challenges for Implementing Collections Data Quality Feedback: synthesizing the community experience. Biodiversity Information Science and Standards 2: e26003. https://doi.org/10.3897/biss.2.26003 [22]

Phillips, M., Basham, A., Cubeta, M., Harris, K., Hendricks, J., Hogue, G., ... & White, L. (2018). Engaging K-12 Audiences with Biodiversity Data through Advancing Digitization for Biodiversity Collections. Biodiversity Information Science and Standards, 2, e26473. https://doi.org/10.3897/biss.2.26473 [23]

Pirlo, J. (2018). Broadening Participation in an Increasingly Digitized World. Biodiversity Information Science and Standards, 2, e25972.https://doi.org/10.3897/biss.2.25972 [24]

Singer, R., Love, K., & Page, L. (2018). FishfindR. net: A New Tool for Fish Biodiversity Collections Communication. Biodiversity Information Science and Standards, 2, e26220. https://doi.org/10.3897/biss.2.26220 [25]

Soltis, P. (2018) Data Attribution from Download to Publication. Biodiversity Information Science and Standards 2: e26060. https://doi.org/10.3897/biss.2.26060 [26]

Symposium: Completing the Data Pipeline: Collections Data Use in Research, Education and Outreach

Borges R, França Costa W, Saraiva A, Imperatriz-Fonseca V, Giannini T (2018) Natural History Collection Data: Traits to Identify Plant-Pollinator Interactions in a Spatial Context. Biodiversity Information Science and Standards 2: e25857. https://doi.org/10.3897/biss.2.25857 [27]

Douglas N, Monfils A, Ellwood E (2018) Tools and Techniques of Implementation Science to Support Wide-Spread Adoption of Biodiversity Literacy Standards. Biodiversity Information Science and Standards 2: e27160. https://doi.org/10.3897/biss.2.27160 [28]

Fisher N, Toms E (2018) Expanding Core Capability in Digitisation by Sharing of Resources: the CSIRO Collections Program for Digitisation of Collection Specimens. Biodiversity Information Science and Standards 2: e27246. https://doi.org/10.3897/biss.2.27246 [29]

Frank J, Mensik L (2018) Lessons Learned in the Creative and Entertainment Industry for User Engagement Applied to Museum Collections 3D Digitization Strategy. Biodiversity Information Science and Standards 2: e25712. https://doi.org/10.3897/biss.2.25712 [30]

Hogue, G., Phillips, M., & Cubeta, M. (2018). A Model for Creating Connections and Building Collections-Based Curricula for Pre-College Educators. Biodiversity Information Science and Standards, 2, e27037. https://doi.org/10.3897/biss.2.27037 [31]

Meeus S. (2018) Herbaria as Functional Trait Databases. Biodiversity Information Science and Standards 2: e25766. https://doi.org/10.3897/biss.2.25766 [32]

Monfils A, Ellwood E, Linton D, Phillips M, White L, Douglas N (2018) Preparing the Next Generation of Data-Driven Scientists through the Biodiversity Literacy in Undergraduate Education – Data Initiative (BLUE Data). Biodiversity Information Science and Standards 2: e27162. https://doi.org/10.3897/biss.2.27162 [33]

Mourad T (2018) Emerging Education Resources and Initiatives: Harnessing the Potential of Disciplinary Societies to advance Biodiversity literacy. BiodiversityInformation Science and Standards 2: e27176. https://doi.org/10.3897/biss.2.27176 [34]

Pirlo, J. (2018). Broadening Participation in an Increasingly Digitized World. Biodiversity Information Science and Standards, 2, e25972. https://doi.org/10.3897/biss.2.25972 [24]

Sessa J, Butts S, Karim T, Nelson G, Norris C, Serratos D, Uhen M (2018) The ePANDDA project: linking the Paleobiology Database, iDigBio, and iDigPaleo for biological and paleontological research, collections management, and outreach. Biodiversity Information Science and Standards 2: e26644. https://doi.org/10.3897/biss.2.26644 [35]

Singer R, Love K, Page L (2018) FishfindR.net: A New Tool for Fish Biodiversity Collections Communication . Biodiversity Information Science and Standards 2: e26220. https://doi.org/10.3897/biss.2.26220 [25]

Symposium: Challenges Implementing Collections Data Quality Feedback: Synthesizing the Community Experience

Bentley, A. (2018). Practical use of aggregator data quality metrics in a collection scenario. Biodiversity Information Science and Standards, 2, e25970. https://doi.org/10.3897/biss.2.25970 [36]

Chapman A (2018) Data Quality – Whose Responsibility is it? Biodiversity Information Science and Standards 2: e26084. https://doi.org/10.3897/biss.2.26084 [37]

Cubey R, Haston E, King S (2018) Label Transcript is Done – Now what do we do with that Data? Biodiversity Information Science and Standards 2: e27055. https://doi.org/10.3897/biss.2.27055 [38]

Grant S, Jones J, Webbink K, Zschernitz R (2018) Repatriation of Augmented Information to an Institutional Database. Biodiversity Information Science and Standards 2: e26479. https://doi.org/10.3897/biss.2.26479 [39]

Mayfield, T. (2018). Who Has Time for Biological Collections Data Quality Feedback? Maybe a Community Can Help. Biodiversity Information Science and Standards, 2, e26083. https://doi.org/10.3897/biss.2.26083 [40]

Nazaire, M. (2018). Integrating Data Quality Feedback: a Data Provider's Perspective. Biodiversity Information Science and Standards, 2, e26007. https://doi.org/10.3897/biss.2.26007 [41]

Other Digitization Presentations

Barkworth M, Cobb N (2018) Embedding Data Sharing in Biodiversity Research. Biodiversity Information Science and Standards 2: e26262. https://doi.org/10.3897/biss.2.26262 [42]

Barry, J. (2018). Applications of Deep Learning in Ornithology. Biodiversity Information Science and Standards, 2, e27251. https://doi.org/10.3897/biss.2.27251 [43]

Blundell, J. (2018) Managing 3D Collections Data: Developing Systems and Metadata for 3D Digitization at Scale. Biodiversity Information Science and Standards 2: e26704. https://doi.org/10.3897/biss.2.26704 [44]

Byrd, C. (2018) Adaptation of Darwin Core Standards and Development of New Standards for Geologic Specimens. Biodiversity Information Science and Standards 2: e25929. https://doi.org/10.3897/biss.2.25929 [45]

Caspers, M., & Schermer, M. (2018) Advancing Collections Management with the Netherlands Biodiversity Data Services. Biodiversity Information Science and Standards 2: e25746. https://doi.org/10.3897/biss.2.25746 [46]

Crawford, C., Opitz, C., & Roberts, T. (2018) Revitalization of the University of Iowa's Bird Egg Collection after 100 Years of Dormancy. Biodiversity Information Science and Standards 2: e26529. https://doi.org/10.3897/biss.2.26529 [47]

Delnavaz, V. (2018). Reviving a Dormant Collection: Updating the Invertebrate Zoology Collection at the University of Kansas Biodiversity Institute for Future Use and Accessibility. Biodiversity Information Science and Standards, 2, e26716. https://doi.org/10.3897/biss.2.26716 [48]

Engledow, H., De Smedt, S., Groom, Q., Bogaerts, A., Stoffelen, P., Sosef, M., &Van Wambeke, P. (2018) Managing a Mass Digitization Project at Meise Botanic Garden: From Start to Finish. Biodiversity Information Science and Standards 2: e25912. https://doi.org/10.3897/biss.2.25912 [49]

Frable, B., Seid, C., Rouse, G., & Hastings, P. (2018). Integration and Curation of At-Risk Collections into the Scripps Institution of Oceanography Collections. Biodiversity Information Science and Standards, 2, e26259. https://doi.org/10.3897/biss.2.26259 [50]

Fuentes-Soriano S, Prihodko L, Manford M, Rogers Z (2018) Shining a New Light on Elmer Ottis Wooton’s Legacy Herbarium and Historical Archive: an Exercise to Increase Student Participation while Promoting Public Engagement. Biodiversity Information Science and Standards 2: e25783. https://doi.org/10.3897/biss.2.25783 [51]

Gassó Miracle E., Loo, T., & Caspers, M. (2018) Southeast Asian Butterfly Project. Biodiversity Information Science and Standards 2: e26319. https://doi.org/10.3897/biss.2.26319 [52]

Gerbracht, J. (2018). COSA: Cloud Object Storage Archive for deep archival of digital data. Biodiversity Information Science and Standards, 2, e25811. https://doi.org/10.3897/biss.2.25811 [53]

Guralnick, R., Wieczorek, J., & Bloom, D. (2018). The Death of VertNet Has Been Greatly Exaggerated But We Still Archive. Biodiversity Information Science and Standards, 2, e26836. https://doi.org/10.3897/biss.2.26836 [54]

Khidas, K., & Tessier, S. (2018). Building Next-Generation Collections: Natural History Specimens, Just One Click Away! Biodiversity Information Science and Standards, 2, e26145. https://doi.org/10.3897/biss.2.26145 [54]

Levy, R. (2018). A Case Study for Connecting Collections and Ecological Research. Biodiversity Information Science and Standards, 2, e26008. https://doi.org/10.3897/biss.2.26008 [55]

McElrath, T., Dmitriev, D., Yoder, M., DeWalt, R., & Dietrich, C. (2018) Specimens, Databases, and Accession Books: Using TaxonWorks to Integrate Multiple Sources of Modern and Historical Data in the INHS Insect Collection. Biodiversity Information Science and Standards, 2, e25896. https://doi.org/10.3897/biss.2.25896 [56]

Schermer, M., Hogeweg, L., & Caspers, M. (2018) Using Deep Learning in Collection Management to Reduce the Taxonomist’s Workload. Biodiversity Information Science and Standards, 2, e25917. https://doi.org/10.3897/biss.2.25917 [57]

Schulz, K., & Hammock, J. (2018). Aggregation and Synthesis of Taxon Information in the Encyclopedia of Life. Biodiversity Information Science and Standards, 2, e25852. https://doi.org/10.3897/biss.2.25852 [58]

Trizna, M. (2018). Best practices for connecting genetic records with specimen data. Biodiversity Information Science and Standards, 2, e26369. https://doi.org/10.3897/biss.2.26369 [59]