Paleo Digitization Workshop: Difference between revisions

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[[Category:Workshop]]
{| class="wikitable" style="float:right;"
! colspan="2" style="background:#D58B28;width:200px;font-size:10pt" | Digitizing the Past and Present for the Future
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| colspan="2" style="text-align:center;font-size:7pt" | [<!--YOU CAN INSERT A NEW IMAGE FOR THE LOGO BETWEEN THE COLON AND THE PIPE-->[Image:Digitizing_Source_Materials_logo.PNG|center|300px|Digitizing_Source_Materials_logo.PNGlogo.PNG]]<br />
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!colspan="2" style="background:#D58B28;text-align:center;font-size:9pt" | Quick Links for Paleontology Digitization Workshop
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|[https://www.idigbio.org/wiki/images/c/c3/PaleontologyDigitizationWorkshopAgenda_%281%29.pdf Paleontology Digitization Workshop Agenda]
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|[https://www.idigbio.org/biblio?f%5bkeyword%5d=272 Paleontology Digitization Workshop Biblio Entries]
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|[https://www.idigbio.org/content/idigbio%E2%80%99s-paleo-digitization-workshop-draws-more-60-attendees-new-haven Paleontology Digitization Workshop Report]
|}
==Paleontology Digitization Workshop wiki==
==Paleontology Digitization Workshop wiki==
<br />
'''This is the wiki page for the paleo digitization workshop held at the Yale Peabody Museum, late September, 2013.'''
==Digitization Resources Wiki Home]]==
*[[Digitization Resources|Digitization Resources Wiki Home]]
<br />
==Paleo Digitization Workshop Announcement==
*[https://www.idigbio.org/content/idigbio-and-yale-peabody-museum-announce-paleontology-digitization-workshop Workshop Announcement]
<br />
==Paleo Digitization Workshop Report==
*[https://www.idigbio.org/content/idigbio%E2%80%99s-paleo-digitization-workshop-draws-more-60-attendees-new-haven Workshop Report]
<br />
<br />
'''This is the wiki page for the upcoming paleo digitization workshop to be held at the Yale Peabody Museum, late September, 2013.'''


==[https://www.idigbio.org/wiki/index.php/Digitization_Resources Digitization Resources Wiki Home]==
==Paleo Digitization Working Group==
*[[Paleo Digitization Working Group|Paleo Digitization Working Group]]
<br />
<br />


==Agenda==
==Agenda==
*[https://www.idigbio.org/wiki/images/c/c3/PaleontologyDigitizationWorkshopAgenda_%281%29.pdf Working Draft Agenda]
*[[Media:PaleontologyDigitizationWorkshopAgenda_%281%29.pdf|Working Draft Agenda]]


== Workshop Recordings ==
== Workshop Recordings ==


*[http://idigbio.adobeconnect.com/p8wub7cpu4i/ Day 1 AM Session 8am-10:15am]
* [http://idigbio.adobeconnect.com/p8wub7cpu4i/ Day 1 AM Session 8am-10:15am]
*[http://idigbio.adobeconnect.com/p6z0enocnqb/ Day 1 AM Session 10:30-11:45am]
* [http://idigbio.adobeconnect.com/p6z0enocnqb/ Day 1 AM Session 10:30-11:45am]
*Day 1 PM Session 1pm-2:45pm
* [http://idigbio.adobeconnect.com/p6ueijpdxp3/ Day 1 PM Session 1pm-2:45pm]


*Day 2 AM Session 8am-10:30am
* [http://idigbio.adobeconnect.com/p390rvp5fu5/ Day 2 AM Session 8am-10:30am]
*Day 2 AM Session 10:45am-12pm
* [http://idigbio.adobeconnect.com/p7sfkczgmyv/ Day 2 AM Session 10:45am-12pm]
*Day 2 PM Session 1:15-3:05pm
* [http://idigbio.adobeconnect.com/p2zg89bx4qe/ Day 2 PM Session 1:15-3:05pm]
*Day 2 PM Session 3:15-5pm
* [http://idigbio.adobeconnect.com/p34rn60tr5n/ Day 2 PM Session 3:15-4:25pm]


==Logistics==
==Logistics==
*[https://www.idigbio.org/wiki/images/f/ff/Paleo_Workshop_Participants_Email.pdf A few last minute details from email of 2013-09-04]
* [[Media:Paleo_Workshop_Participants_Email.pdf|A few last minute details from email of 2013-09-04]]
*[https://www.idigbio.org/wiki/images/1/1b/Breakfast_places_and_opening_times_near_the_Omni.pdf Breakfast places and opening times near the Omni]
* [[Media:Breakfast_places_and_opening_times_near_the_Omni.pdf|Breakfast places and opening times near the Omni]]
*[https://www.idigbio.org/wiki/images/4/4f/EatingInNewHaven.pdf A few Recommendations for Eating in New Haven]
* [[Media:EatingInNewHaven.pdf|A few recommendations for eating in New Haven]]
*[https://maps.google.com/maps?saddr=Omni+Hew+Haven&daddr=Peabody+Museum+of+Natural+History,+Whitney+Avenue,+New+Haven,+CT&hl=en&ll=41.310792,-72.924113&spn=0.024757,0.058579&sll=41.3086,-72.918277&sspn=0.024758,0.058579&geocode=FT1GdgIdGTen-yFzsM6g4A_8jCnvWgBFS9jniTFzsM6g4A_8jA%3BFZ5udgId5U-n-yFHgEMNO3loAynRHeF0yNnniTFHgEMNO3loAw&oq=Peabody+Museum&t=h&dirflg=w&mra=ltm&z=15 Walking from the Omni to the Peabody Museum]
* [https://maps.google.com/maps?saddr=Omni+Hew+Haven&daddr=Peabody+Museum+of+Natural+History,+Whitney+Avenue,+New+Haven,+CT&hl=en&ll=41.310792,-72.924113&spn=0.024757,0.058579&sll=41.3086,-72.918277&sspn=0.024758,0.058579&geocode=FT1GdgIdGTen-yFzsM6g4A_8jCnvWgBFS9jniTFzsM6g4A_8jA%3BFZ5udgId5U-n-yFHgEMNO3loAynRHeF0yNnniTFHgEMNO3loAw&oq=Peabody+Museum&t=h&dirflg=w&mra=ltm&z=15 Walking map from the Omni to the Peabody Museum]


==Collaborative Notes Documents==
==Collaborative Notes Documents==
*[https://docs.google.com/document/d/1LNyf25xoppjYtCKbX4_yXvpSM50tAZx9lPKXTuCzLPU/edit?usp=sharing Day 1]
* [https://docs.google.com/document/d/1LNyf25xoppjYtCKbX4_yXvpSM50tAZx9lPKXTuCzLPU/edit?usp=sharing Day 1]
*[https://docs.google.com/document/d/1kKAoNsRF-JmyalzWNFMCpqhbrygJeIo-jx0EBn4b37Q/edit?usp=sharing Day 2]
* [https://docs.google.com/document/d/1kKAoNsRF-JmyalzWNFMCpqhbrygJeIo-jx0EBn4b37Q/edit?usp=sharing Day 2]
*[https://docs.google.com/document/d/1pkRIUDx-05GLFfUJUJyHpkLlhf7ZKRu5w5I7mZzWQTo/edit Database discussion notes]
* [https://docs.google.com/document/d/1pkRIUDx-05GLFfUJUJyHpkLlhf7ZKRu5w5I7mZzWQTo/edit Database discussion notes]


==Presentations==
==Presentations==
*[https://www.idigbio.org/wiki/images/6/64/IDigBio_Intro_MISC_Data_standards.pdf Introduction to iDigBio and Data Standards, Gil Nelson]
* [[Media:IDigBio_Intro_MISC_Data_standards.pdf|Introduction to iDigBio and Data Standards, Gil Nelson]]
*[https://www.idigbio.org/wiki/images/a/a4/Norris_Digitization_of_Paleo_Collections.pdf Digitization of paleontology collections: An overview, Chris Norris]
* [[Media:Norris_Digitization_of_Paleo_Collections.pdf|Digitization of paleontology collections: An overview, Chris Norris]]
*[https://www.idigbio.org/wiki/images/7/71/Education_Outreach_MacFadden.pdf Engaging downstream users of paleocollections through iDigBio E&O (Education and Outreach), Bruce MacFadden]
* [[Media:Education_Outreach_MacFadden.pdf|Engaging downstream users of paleocollections through iDigBio E&O (Education and Outreach), Bruce MacFadden]]
*[https://www.idigbio.org/wiki/images/d/df/DMSmith_IntegratingDigitizationInitiatives.pdf Integrating with existing digitization initiatives, Dena Smith]
* [[Media:DMSmith_IntegratingDigitizationInitiatives.pdf|Integrating with existing digitization initiatives, Dena Smith]]
*[https://www.idigbio.org/wiki/images/c/c2/DMSmith_Fossil_Insect_TCN.pdf Fossil Insect Collaborative A deep-time approach to studying diversification and response to environmental change, Dena Smith]
* [[Media:DMSmith_Fossil_Insect_TCN.pdf|Fossil Insect Collaborative A deep-time approach to studying diversification and response to environmental change, Dena Smith]]
*[https://www.idigbio.org/wiki/images/2/2a/PaaleoNiches_Farrell.pdf PaleoNiches TCN, Una Farrell]
* [[Media:PaaleoNiches_Farrell.pdf|PaleoNiches TCN, Una Farrell]]
*[https://www.idigbio.org/wiki/images/4/4b/Workflow_lightning_round_UPDATED.pdf Digitization workflow lightning rounds]
* [[Media:Workflow_lightning_round_UPDATED.pdf|Digitization workflow lightning rounds]]
*[https://www.idigbio.org/wiki/images/3/35/IDigBio_Workflows.pdf iDigBio 3D Objects in drawers and boxes workflows, Gil Nelson]
* [[Media:Gall_Tuesday.pdf|Managing digitization personnel and workflows, Larry Gall]]
*[https://www.idigbio.org/wiki/images/8/84/ButtsYPM.pdf YPM-IP workflow with voice recognition imaging, Susan Butts]
* [[Media:IDigBio_Workflows.pdf|iDigBio 3D Objects in drawers and boxes workflows, Gil Nelson]]
*[https://www.idigbio.org/wiki/images/1/16/Workflows_Molineux.pdf Creating workflows for effective data migration and imaging in an invertebrate paleontology collection, Ann Molineux]
* [[Media:ButtsYPM.pdf|YPM-IP workflow with voice recognition imaging, Susan Butts]]
*[https://www.idigbio.org/wiki/images/b/ba/Hollis_Smithsonian.pdf Undertaking digitization in the NMNH paleobiology collection and digitization strategies at the Smithsonian Institution, Kathy Hollis]
* [[Media:Workflows_Molineux.pdf|Creating workflows for effective data migration and imaging in an invertebrate paleontology collection, Ann Molineux]]
*[https://www.idigbio.org/wiki/images/5/56/DMSmith_Federal_collections.pdf Specimens from federal lands, Dena Smith]
* [[Media:Hollis_Smithsonian.pdf|Undertaking digitization in the NMNH paleobiology collection and digitization strategies at the Smithsonian Institution, Kathy Hollis]]
*[https://www.idigbio.org/wiki/images/c/c2/Norris_Workflows_for_Digitizing_Vertebrate_Paleo.pdf Workflows for digitizing vertebrate paleontology, Chris Norris]
* [[Media:DMSmith_Federal_collections.pdf|Specimens from federal lands, Dena Smith]]
*[https://www.idigbio.org/wiki/images/e/e7/Roger_iDigBio_2013.pdf Digital Imaging Basics:From Y2K to the Present, Roger Burkhalter]
* [[Media:Norris_Workflows_for_Digitizing_Vertebrate_Paleo.pdf|Workflows for digitizing vertebrate paleontology, Chris Norris]]
*[https://www.idigbio.org/wiki/images/7/71/3D_Digitzation_Starly.pdf 3D Digitization of Biological Specimens, Binil Starly]
* [[Media:PredigitizationCuration.pdf|Predigitization practices, Jessica Utrup]]
*[https://www.idigbio.org/wiki/images/f/fa/Specify.pdf Specify, Una Farrell & Talia Karim ]
* [[Media:Georeferencing_paleo_collections.pdf|Georeferencing paleontology collections, Una Farrell & Jessica Utrup]]
*[https://www.idigbio.org/wiki/images/1/1b/Arctos_for_Paleo_Collections_Rousseau.pdf Arctos for paleontology collections: Examples from the University of Alaska Museum earth sciences collection digitization project, Julie Rousseau]
* [[Media:Roger_iDigBio_2013.pdf|Digital Imaging Basics:From Y2K to the Present, Roger Burkhalter]]
*[https://www.idigbio.org/wiki/images/2/22/OpenRefine.pdf OpenRefine, Una Farrell]
* [[Media:3D_Digitzation_Starly.pdf|3D Digitization of Biological Specimens, Binil Starly]]
* [[Media:Gall_Wednesday.pdf|Digitizing Peabody Paleo: history, EMu, portals & campus-wide digital infrastructures at Yale, Larry Gall]]
* [[Media:Specify.pdf|Specify, Una Farrell & Talia Karim]]
* [[Media:Arctos_for_Paleo_Collections_Rousseau.pdf|Arctos for paleontology collections: Examples from the University of Alaska Museum earth sciences collection digitization project, Julie Rousseau]]
* [[Media:OpenRefine.pdf|OpenRefine, Una Farrell]]
* [[Media:Adrain_Multi.pdf|Digitizing multi-disciplinary collections: a collaborative approach at the University of Iowa, Tiffany Adrain]]
* [[Media:Imaging_in_Amber_Grimaldi.pdf|Imaging in amber, Dave Grimaldi]]
* [[Media:Landis-iDigBio-Paleo_Digitize-final.pdf|How to photograph paleobotany & micropaleontology specimens at SNOMNH: A work in progress, Margaret Landis]]
* [[Media:2013PaleoImageLightning.pdf|Imaging lightning rounds, Jessica Utrup, emcee]]


==Workflows==
==Workflows==
*[https://www.idigbio.org/wiki/images/a/a4/Droid4_Workflow.pdf DROID 4 Workflows (DRAFT): 3D Objects in Boxes and Drawers]
* [[Media:Droid4_Workflow.pdf|DROID 4 Workflows (DRAFT): 3D Objects in Boxes and Drawers]]


==Documents==
==Documents==
*[https://www.idigbio.org/wiki/images/b/bf/NHMN_DigitizationPlan.pdf NMNH Unit Digitization Plan 2013, Kathy Hollis]
* [[Media:NHMN_DigitizationPlan.pdf|NMNH Unit Digitization Plan 2013, Kathy Hollis]]
*[https://www.idigbio.org/wiki/images/2/20/NMNH_Digital_Asset_Plan_Template.pdf NMNH Digital Asset Management Plan Template, Kathy Hollis]
* [[Media:NMNH_Digital_Asset_Plan_Template.pdf|NMNH Digital Asset Management Plan Template, Kathy Hollis]]
*[https://www.idigbio.org/wiki/images/1/13/NMNH_Digital_Asset_Management_Plan_EMU.pdf NMNH Digital Asset Management Plan EMU, Kathy Hollis]
* [[Media:NMNH_Digital_Asset_Management_Plan_EMU.pdf|NMNH Digital Asset Management Plan EMU, Kathy Hollis]]
*[http://www.utexas.edu/tmm/npl/projects/imaging University of Texas scripts]
* [http://www.utexas.edu/tmm/npl/projects/imaging University of Texas scripts]
* [http://arctos.database.museum/info/avs.html Comparison between Arctos and Specify (from a decidely Arctos perspective)]
* [[Media:NMNH_Paleo_Specimen_Image_Procedures_2011.pdf|NMNH Paleo Guidelines for Specimen Images]]
* [[Media:Paul_Selden_Protocol.pdf|Paul Selden's workflow (including hardware and software notes) for imaging fossil spiders]]


==Workshop Planning Team==
==Workshop Planning Team==
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