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Digitization of each specimen in the CAP TCN will result in a high-resolution image, a databased record of collection metadata, a georeferenced point, and the reproductive status of the specimen. New tools will be developed for the public to search and display phenological data through a Symbiota portal interface. The CAP TCN will develop novel data standards for capturing and sharing trait data from specimens. Building on already successful national and regional programs, the CAP TCN will partner with schools, universities, botanical clubs, and the general public to crowd source phenological measurements through online expeditions, workshops, new college courses, and K-12 educational programs. The CAP TCN will provide a historical record of plants currently being monitored through the National Phenology Network and other regional programs. Finally, this award will expand efforts to train the "next generation" of museum curators, collectors, and researchers. | Digitization of each specimen in the CAP TCN will result in a high-resolution image, a databased record of collection metadata, a georeferenced point, and the reproductive status of the specimen. New tools will be developed for the public to search and display phenological data through a Symbiota portal interface. The CAP TCN will develop novel data standards for capturing and sharing trait data from specimens. Building on already successful national and regional programs, the CAP TCN will partner with schools, universities, botanical clubs, and the general public to crowd source phenological measurements through online expeditions, workshops, new college courses, and K-12 educational programs. The CAP TCN will provide a historical record of plants currently being monitored through the National Phenology Network and other regional programs. Finally, this award will expand efforts to train the "next generation" of museum curators, collectors, and researchers. | ||
=== Project Websites & Social Media === | === Project Websites & Social Media === | ||
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[http://cch2.org/portal/index.php Twitter Page] | [http://cch2.org/portal/index.php Twitter Page] | ||
=== Project Leadership === | === Project Leadership === | ||
''Project sponsor:'' California Polytechnic State University San Luis Obispo [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802301 (NSF Award #1802301)] | ''Project sponsor:'' California Polytechnic State University San Luis Obispo [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802301 (NSF Award #1802301)] | ||
''Principal Investigator (PI):'' | ''Principal Investigator (PI):'' Jenn Yost<br> | ||
''Project Manager:'' Katie Pearson<br> | ''Project Manager:'' [mailto:kdpearso@calpoly.edu Katie Pearson]<br> | ||
''Data Manager:'' Jason Alexander<br> | ''Data Manager:'' Jason Alexander<br> | ||
=== Phenological Data === | |||
The CAP TCN has developed tools, workflows, and guides for creating and storing specimen-based phenological data. The most comprehensive repository of these resources can be found on our [https://www.capturingcaliforniasflowers.org/phenology.html project website]. Key resources are also linked below. | |||
*Scoring Phenological Traits Using Symbiota Tools: [[File:PhenologicalScoringCAPTCN.pdf]] | |||
*Downloading trait data from the CCH2 portal: [https://www.capturingcaliforniasflowers.org/phenology.html#Output here] | |||
=== Protocols & Workflows === | |||
The CAP Network has created a semi-comprehensive digitization manual that aggregates documentation from the digitization process, from imaging to image processing to transcription and georeferencing. This document is available here: [[File:CAP Digitization Manual.pdf]] | |||
The Network also developed a manual for using their Symbiota data portal, CCH2, than can be generalized for users of other Symbiota portals: [[File:CAP Symbiota Guide.pdf]] | |||
Additional protocols, workflows, and other documentation can be found on the project website: http://www.capturingcaliforniasflowers.org | |||
=== Publications === | |||
Pearson KD, Love NR, Ramirez Parada T, Mazer SJ, Yost JM. 2021. Phenological trends in the California poppy (Eschscholzia californica): Digitized herbarium specimens reveal intraspecific variation in the sensitivity of flowering date to climate change. ''Madroño''. | |||
Goëau H, Mora-Fallas A, Champ J, Love NLR, Mazer SJ, Mata-Montero E, Joly A, Bonnet P. 2020. A new fine-grained method for automated visual analysis of herbarium specimens: A case study for phenological data extraction. ''Applications in Plant Sciences'' 8(6):e11368. doi:10.1002/aps3.11368 | |||
Pearson KD, Nelson G, Aronson MFJ, Bonnet P, Brenskelle L, Davis CC, Denny EG, Ellwood ER, Goëau H, Heberling JM, Joly A, Lorieul T, Mazer SJ, | |||
Meineke EK, Stucky BJ, Sweeney P, White AE, Soltis PS. 2020. Machine learning using digitized herbarium specimens to advance phenological research. ''BioScience''. 70(7):610-620. doi:[https://academic.oup.com/bioscience/article/70/7/610/5825721 10.1093/biosci/biaa044] | |||
Love NLR, Park IW, Mazer SJ. 2019. A new phenological metric for use in pheno‐climatic models: A case study using herbarium specimens of Streptanthus tortuosus. Applications in Plant Sciences 7(7): e11276. doi:[https://bsapubs.onlinelibrary.wiley.com/doi/full/10.1002/aps3.11276 10.1002/aps3.11276] | |||
Yost JM, Pearson KD, Alexander J, Gilbert E, et al. 2019. The California Phenology Collections Network: Using digital images to investigate phenological change in a biodiversity hotspot. ''Madroño''. 66(4):130-141. doi:[https://bioone.org/journals/madro%C3%B1o/volume-66/issue-4/0024-9637-66.4.130/THE-CALIFORNIA-PHENOLOGY-COLLECTIONS-NETWORK--USING-DIGITAL-IMAGES-TO/10.3120/0024-9637-66.4.130.full 10.3120/0024-9637-66.4.130] | |||
Lorieul T, Pearson KD, Ellwood ER, Goëau H, Molino J-F, Sweeney PW, Yost JM, Sachs J, Mata-Montero E, Nelson G, Soltis PS, Bonnet P, Joly A. 2019. Toward a large-scale and deep phenological stage annotation of herbarium specimens: case studies from temperate, tropical, and equatorial floras. ''Applications in Plant Sciences''. 7(3):e1233. [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6426157/ doi:10.1002/aps3.1233] | |||
Alexander, Jason A. 2019. Upcoming changes in the Consortium of California Herbaria. ''Madroño'', 66(1):37-38. [https://doi.org/10.3120/0024-9637-66.1.37 doi:10.3120/0024-9637-66.1.37] | |||
=== Professional Presentations === | |||
====Conference Talks==== | |||
* Yost J, Pearson KD. Digitizing California’s National Forest Herbaria. [Lightning Talk]. Northern California Botanists Symposium January 11, 2022. | |||
* Pearson KD. A public resource for tracking invasive plants: the Consortium of California Herbaria’s CCH2 Portal. (Lightning Talk). California Invasive Plant Council 30-Year Anniversary Symposium. October 27, 2021. | |||
*Pearson KD, Yost J, et. al. Data standards for the phenology of plant specimens. [Virtual] TDWG 2021. October 19, 2021. [https://doi.org/10.3897/biss.5.74372 Abstract] | |||
*Pearson KD, Love N, Ramirez Parada T, Mazer S, Yost J. Phenological trends in the California poppy (Eschscholzia californica): Digitized herbarium specimens reveal intraspecific variation in the sensitivity of flowering date to climate change. [Virtual] Botany 2021. July 20, 2021. | |||
*Pearson KD, Gilbert E, Tyrrell C, Franz N, Yost J. New tools to score, view, and download (phenological) trait data in a Symbiota portal. 5th Annual Digital Data in Biodiversity Research Conference. [Virtual]. June 9, 2021. [https://drive.google.com/file/d/12iFjriVYG13S2VMwxyfiywoNpjcDwjNW/view Recording] | |||
*Pearson KD, Yost J. The California Phenology Network: Building capacity for sharing specimen-based phenological data. Ecological Society of America Annual Meeting. [Virtual]. August 2020. [https://youtu.be/YO65BPO2MIY Recording] | |||
*Pearson KD, Yost J, Ramirez Parada T, Love N. Creating new data, questions, and scientists: A new phenology-focused CURE using herbarium specimen data. Botany 2020. [Virtual]. July 2020. [https://youtu.be/Le1zewbdOXs Recording] | |||
*Yost J, Pearson KD, Alexander J, Love N, Mazer S, Mishler B. Capturing flowering time data from herbarium specimens: The California Phenology TCN. Botany 2020. [Virtual]. July 2020. [https://youtu.be/rYVm5XAIQvI Recording] | |||
*Pearson KD, Yost J, Ramirez Parada T, Love N. Creating new data, questions, and scientists. 4th Annual Digital Data in Biodiversity Research Conference. [Virtual]. June 2, 2020. [https://drive.google.com/file/d/1NDFVNYzgwF3WTm13NNWgQEDulZd4_cUv/view Recording] | |||
*Pearson KD. Using Notes from Nature to digitize California herbaria. Northern California Botanists Symposium, Chico, CA. January 13, 2020. [https://www.youtube.com/watch?v=AQv3EXy03r8&feature=youtu.be&t=1528 Recording] | |||
*Yost J, Pearson KD. California Phenology TCN: Starting Year 2. ADBC Summit 2019. October 2019. Gainesville, FL. [https://www.idigbio.org/wiki/images/d/d7/CAP_ADBCSummit2019.pdf Slides] | |||
*Pearson KD. Old plants, new tricks: Phenological revelations from herbarium specimens. Southern California Botanists Symposium, Claremont, CA. October 5, 2019. | |||
*Alexander J. Upcoming changes in the Consortium of California Herbaria. Northern California Botanists Symposium. January 2019. Chico, CA. | |||
*Yost J. Introducing the California Phenology TCN. ADBC Summit 2018. October 2019. Gainesville, FL. [https://mediasite.video.ufl.edu/Mediasite/Play/1efdcec7f4414a7783798fc2b88ebe5e1d?catalog=588bdfbb38134fac83c6ef66a7c59e4e21 Recording] | |||
====Posters==== | |||
*Pearson KD, Love N, Ramirez Parada T, Mazer S, Yost J. Digitized herbarium specimens reveal intraspecific variation in the sensitivity of flowering date to climate change: A Case Study of the California Poppy (Eschscholzia californica). Southern California Botanists Symposium. [Virtual]. October 16, 2021. | |||
*Pearson KD, Yost J. Capturing California’s flowers: Mobilizing phenological data from herbarium specimens. Biodiversity Digitization: Celebrating a Decade of Progress. September 22, 2021. [https://drive.google.com/file/d/13NDPRDxb53DIQ2rt1ym_IOsitocEPrbL/view?usp=sharing View Here] | |||
*Pearson KD, Love NR, Ramirez Parada T, Mazer SJ, Yost JM. New, publicly-available source of phenological data reveals intraspecific variation in the sensitivity of flowering date to climate change: A case study of the California poppy (Eschscholzia californica). Ecological Society of America Annual Meeting. [Virtual]. August 5, 2021. [https://eventscribe.net/2021/ESA/fsPopup.asp?Mode=posterinfo&PosterID=406888 View Here] | |||
*Waselkov K. Capturing the Flowers of the Sierra Nevada Mountains: The Contribution of the Fresno State Herbarium (FSC) to the California Phenology Network. Society for the Preservation of Natural History Collections. June 2020. [https://spnhc.biowikifarm.net/wiki/Posters View Here] | |||
*Pearson KD, Yost JM. Creating and mobilizing specimen-based plant phenological data: The California Phenology Network. Ecological Society of America Annual Meeting. [Virtual]. August 2020. https://www.capturingcaliforniasflowers.org/uploads/1/6/3/7/16372936/cap_tcn_esa2020_v2.pdf | |||
*Waselkov K, Riley R, Peña M, Pearson K, Yost J. Capturing the flowers of the Sierra Nevada Mountains: The Contribution of the Fresno State Herbarium (FSC) to the California Phenology Network. Society for the Preservation of Natural History Collections. [Virtual]. June 2020. https://spnhc.biowikifarm.net/wiki/Posters#/media/File:Waselkov_spnhc_2020_optimized.jpg | |||
*Cazares J, Carter BE. Capturing phenology from herbarium specimens to understand flowering period in Winecup Clarkia (Clarkia purpurea ssp. quadrivulnera, Onagraceae). Northern California Botanists Symposium, Chico, CA. January 13-14, 2020. http://www.norcalbotanists.org/files/NCB_2020_Poster34_Cazares.pdf | |||
*Crowe RE, Bowler PA. Reopening the UCI Herbarium (IRVC). Southern California Botanists Symposium, Claremont, CA. October 2, 2019. | |||
*McGowan H, Fisher AE. A Flora of the Chiquito Basin, Santa Ana Mountains, Peninsular Ranges of Southern California. Botany 2019. Tucson, AZ. July 2019. | |||
*Olmeda BL, Cuadra S, Barnett A, Rice M, Fisher AE. Capturing California’s Flowers at the Beach: Herbarium Specimen Imaging at Long Beach State (LOB). Botany 2019. Tucson, Arizona. July 2019. | |||
*Tang K, Fisher AE. A Visual Guide and Morphometric Analysis of Leaf Shapes of Common Shrubs of the Santa Ana Mountains of Southern California. Botany 2019. Tucson, AZ. July 2019. | |||
*Pearson KD, Yost JM. Capturing flowering time data from herbarium specimens: The California Phenology TCN. Botany 2019, Tucson, AZ. July 28, 2019. | |||
*Pearson KD, Yost JM. Capturing flowering time data from herbarium specimens: The California Phenology TCN. Digital Data in Biodiversity Research Conference, New Haven, CT. June 11, 2019. | |||
*Pearson KD, Yost JM. (Presented by A Ayers). Capturing flowering time data from herbarium specimens: The California Phenology TCN. California Botanical Society Graduate Student Symposium. San Luis Obispo, CA. April 6, 2019. | |||
*Pearson KD, Yost JM. Capturing flowering time data from herbarium specimens: The California Phenology TCN. Southern California Botanists Symposium, Claremont, CA. November 3, 2018. | |||
=== Education and Outreach === | |||
====Citizen Science Engagement==== | |||
The CAP Network engages citizen scientists and volunteers through [https://www.zooniverse.org/organizations/md68135/notes-from-nature Notes from Nature] expeditions. | |||
====Public Presentations==== | |||
*Waselkov K. CSUF Herbarium and its use in phenology research. Soil and Water Conservation Society, California-Nevada Chapter. October 20, 2021. | |||
*Waselkov K, Riley R. Leafing through the past: A virtual walkthrough of the largest herbarium in the San Joaquin Valley. California Native Plant Society Sequoia Chapter. October 12, 2021. | |||
*Yost J, Pearson KD, Love N, Ramirez Parada T, Mazer S. SPNHC Natural History Education Demo Camp. 28-29 June 2021. | |||
*Pearson KD. 2021. Herbarium Specimens and Digitization. San Luis Obispo Master Gardeners. [Virtual]. May 13, 2021. | |||
*Yost J. 2021. Natural History in the Digital Age. San Luis Obispo Botanical Garden. [Virtual]. February 20, 2021. | |||
*Pearson KD. Capturing California's Flowers: Building community, capacity, and discovery by digitizing herbarium specimens. Friends of the Chico State Herbarium Annual Meeting. [Virtual]. October 22, 2020. | |||
*Pearson KD. Green Guardians: How plants protect biodiversity (and you can help from home!). San Luis Obispo Coast District Biodiversity Week. [Virtual]. September 12, 2020. https://www.youtube.com/watch?v=V8NCB413TII | |||
*Yost J, Pearson KD. Capturing California’s flowers. California Native Plant Society North Coast Chapter. [Virtual]. May 20, 2020. https://www.youtube.com/watch?v=2sIQ4YKpg4Y | |||
====Outreach Events==== | |||
*Herbarium Specimens and Digitization. November 3. 2021. Taught 33 UC Irvine students how to transcribe specimens in Notes from Nature as part of biological sustainability course. | |||
*WeDigBio CSULB. October 15, 2021. 40 participants | |||
*WeDigBio Fresno CNPS. October 14, 2021. 11 participants | |||
*WeDigBio Virtual, Herbarium Happy Hour. October 15, 2021. 157 participants. | |||
*WeDigBio @ OSU. October 15, 2021. 35 participants | |||
*Herbarium Specimens and Digitization. April 21, 2021. Taught UC Irvine students how to transcribe specimens in Notes from Nature as part of biological sustainability course. | |||
*WeDigBio Spring 2021: Botany Brunch. April 10, 2021. 42 participants | |||
*WeDigBio Spring 2021: Herbarium Happy Hour. April 8, 2021. 55 participants | |||
*Herbarium Specimens and Digitization. January 20, 2021. Taught 22 UC Irvine students how to transcribe specimens in Notes from Nature as part of biological sustainability course. | |||
*Waking Up with WeDigBio. October 17, 2020. Cumulative with Happy Hour: 95 participants | |||
*WeDigBio Happy Hour. October 15, 2020. | |||
*Citizen science workshop: Help science study wildflowers! Led by Katie Pearson and aided by Annie Ayers, Josiah Gilbert, and Hunter Johnson. Audience: CNPS-SLO chapter. November 7, 2019. | |||
*WeDigBio. October 2019. Volunteer mounters (approx. 95 students) participated in transcription via Notes from Nature. | |||
*Citizen Science Day. April 13, 2019. Over 20 students learned to transcribe records in Notes from Nature. | |||
*Cal Poly Open House. April 12-13, 2019. Tour to over 60 prospective students and their parents. | |||
====Educational Materials==== | |||
* Pearson K, Ramirez Parada T, Mazer S, Love N, Yost J. 2021. Exploring Plant Phenology using Herbarium Specimens: Lab or Workshop. QUBES Educational Resources. doi:[https://qubeshub.org/publications/2476/?v=1 10.25334/NBY6-5A67] | |||
*Pearson K, Love N, Mazer S. 2020. Peek into Plant Diversity using Herbarium Specimens (Online!). QUBES Educational Resources. doi:[https://qubeshub.org/publications/2068/1 10.25334/YW7C-P170] | |||
*Pearson K, Love N, Parada T, Yost J. 2020. A New Phenology-focused CURE using Herbarium Specimen Data. Cultivating Scientific Curiosity, QUBES Educational Resources. doi:[https://qubeshub.org/publications/1956/1 10.25334/DBYN-ZX80] | |||
*Fisher A. 2019. An Introduction to Biodiversity Databases and Specimen Images. Fall 2019 BLUE FMN, QUBES Educational Resources. doi:[https://qubeshub.org/publications/1493/1 10.25334/1NCG-T718] | |||
====Undergraduate Courses Conducted==== | |||
*Spring 2022 - Herbarium digitization internship. Directed by Cal Poly. 13 students enrolled from 7 institutions | |||
*Winter 2022 - Herbarium digitization internship. Directed by Cal Poly. 13 students enrolled from 6 institutions | |||
*Fall 2021 – Herbarium digitization internship. Directed by Cal Poly. 31 students enrolled from 5 institutions (CSU Fullerton, OSU, SFSU, UC Irvine, UCLA) | |||
*Spring 2021 – Phenological research using herbarium specimens. Directed by UCSB. 15 students from UCSB. | |||
*Spring 2021 – Advanced herbarium digitization internship. Directed by Cal Poly. 18 students enrolled from 7 institutions (CSU San Bernardino, Pacific Union University, CSU San Francisco, UC Irvine, UC Los Angeles, UC Santa Barbara, UC Santa Cruz) | |||
*Winter 2021 – Herbarium specimen georeferencing Directed by Oregon State University and aided by Cal Poly. 12 students from Oregon State University. | |||
*Winter 2021 – Phenological research using herbarium specimens. Directed by Cal Poly and aided by UCSB. 11 students from Cal Poly. | |||
*Winter 2021 – Herbarium digitization internship. Directed by Cal Poly. 31 students enrolled from 10 institutions (Cal Poly, CSU Fresno, CSUSB, Pacific Union College, SFSU, UC Irvine, UCLA, UC Riverside, UCSB, UCSC). | |||
*Fall 2020 – Herbarium digitization internship. Directed by Cal Poly. Completed by 58 students from 6 institutions (Cal Poly, CSU Long Beach, Oregon State, UC Irvine, UC Santa Barbara, UC Santa Cruz) | |||
*Spring 2020 – Phenological research using herbarium specimens. Directed by Cal Poly and aided by UCSB. 19 students from Cal Poly. | |||
<p> | |||
=== Project Collaborators === | === Project Collaborators === | ||
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=====California Polytechnic State University San Luis Obispo (OBI)===== | =====California Polytechnic State University San Luis Obispo (OBI)===== | ||
Jennifer Yost (Lead PI), California Polytechnic State University San Luis Obispo [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802301 (NSF Award #1802301)] | Jennifer Yost (Lead PI), California Polytechnic State University San Luis Obispo [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802301 (NSF Award #1802301)]<br> | ||
Katie Pearson, project manager | |||
=====University of California - Berkeley (UC/JEPS)===== | =====University of California - Berkeley (UC/JEPS)===== | ||
Brent | Brent Mishler, (PI), University of California - Berkeley [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802163 (NSF Award #1802163)]<br> | ||
Jason Alexander, data manager | |||
=====University of California - Santa Barbara (UCSB)===== | =====University of California - Santa Barbara (UCSB)===== | ||
Susan J. Mazer, (PI), University of California - Santa Barbara [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802181 (NSF Award #1802181)]<br> | Susan J. Mazer, (PI), University of California - Santa Barbara [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802181 (NSF Award #1802181)]<br> | ||
Katja Seltmann (Co-PI), University of California - Santa Barbara <br> | Katja Seltmann (Co-PI), University of California - Santa Barbara <br> | ||
Greg Wahlert, collections manager<br> | |||
=====California Parks and Recreation, Colorado Desert District (BSCA)===== | =====California Parks and Recreation, Colorado Desert District (BSCA)===== | ||
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=====California State University, San Bernardino (CSUSB)===== | =====California State University, San Bernardino (CSUSB)===== | ||
Kimberlyn Williams, (PI), California State University, San Bernardino | Kimberlyn Williams, (PI), California State University, San Bernardino<br> | ||
Lua Lopez, assistant professor<br> | |||
=====University of California - Davis (DAV)===== | =====University of California - Davis (DAV)===== | ||
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=====Humboldt State University (HSC)===== | =====Humboldt State University (HSC)===== | ||
Michael R. Mesler, (PI), Humboldt State University [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802185 (NSF Award #1802185)]<br> | Michael R. Mesler, (PI), Humboldt State University [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802185 (NSF Award #1802185)]<br> | ||
Oscar Vargas, assistant professor<br> | |||
Robin Bencie, collections manager | Robin Bencie, collections manager | ||
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=====University of California - Los Angeles (LA)===== | =====University of California - Los Angeles (LA)===== | ||
Philip Rundel, (PI), University of California - Los Angeles [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802199 (NSF Award #1802199)]<br> | Philip Rundel, (PI), University of California - Los Angeles [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802199 (NSF Award #1802199)]<br> | ||
Victoria Sork, herbarium director<br> | |||
Thomas Huggins, herbarium coordinator | Thomas Huggins, herbarium coordinator | ||
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=====Santa Barbara Botanic Garden (SBBG)===== | =====Santa Barbara Botanic Garden (SBBG)===== | ||
Matt Guilliams, (PI) Santa Barbara Botanic Garden [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802176 (NSF Award #1802176)]<br> | Matt Guilliams, (PI) Santa Barbara Botanic Garden [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802176 (NSF Award #1802176)]<br> | ||
Susana Delgadillo, collections assistant | |||
=====San Diego Natural History Museum (SD)===== | =====San Diego Natural History Museum (SD)===== | ||
Layla Aerne Haines, (PI), San Diego Natural History Museum [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802186 (NSF Award #1802186)]<br> | Layla Aerne Haines, (PI), San Diego Natural History Museum [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802186 (NSF Award #1802186] and [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001535 #2001535)]<br> | ||
Jon Rebman, (co-PI), San Diego Natural History Museum <br> | Jon Rebman, (co-PI), San Diego Natural History Museum <br> | ||
Line 129: | Line 272: | ||
=====University of California - Riverside (UCR)===== | =====University of California - Riverside (UCR)===== | ||
Amy Litt, (PI), University of California - Riverside [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802188 (NSF Award #1802188)]<br> | Amy Litt, (PI), University of California - Riverside [http://www.nsf.gov/awardsearch/showAward?AWD_ID=1802188 (NSF Award #1802188)]<br> | ||
Andy Sanders, curator | Andy Sanders, curator<br> | ||
Mike Cohen, volunteer collections manager | |||
=====University of California - Santa Cruz (UCSC)===== | =====University of California - Santa Cruz (UCSC)===== | ||
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==== 2020 PEN Participants ==== | ==== 2020 PEN Participants ==== | ||
=====Oregon State University (OSC)===== | |||
Aaron Liston (lead PI), professor and herbarium director [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001644 (NSF Award #2001644)] <br> | |||
James Mickley, herbarium curator | |||
=====California Department of Food and Agriculture (CDA)===== | =====California Department of Food and Agriculture (CDA)===== | ||
Genevieve Walden, senior plant systematist | Genevieve Walden (PI), senior plant systematist | ||
=====Pacific Union College (PUA)===== | =====Pacific Union College (PUA)===== | ||
Aimee Wyrick-Brownsworth, chair and associate professor of biology | Aimee Wyrick-Brownsworth (PI), chair and associate professor of biology [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001644 (NSF Award #2001644)] | ||
=====San Francisco State University (SFSU)===== | =====San Francisco State University (SFSU)===== | ||
Jason Cantley, assistant professor | Jason Cantley (PI), assistant professor [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001641 (NSF Award #2001641)] | ||
=====California State University, Stanislaus (SHTC)===== | =====California State University, Stanislaus (SHTC)===== | ||
Andrew Gardner, assistant professor of botany | Andrew Gardner (PI), assistant professor of botany [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001644 (NSF Award #2001644)] | ||
=====University of Nevada, Las Vegas (UNLV)===== | =====University of Nevada, Las Vegas (UNLV)===== | ||
Lloyd Stark, associate professor | Lloyd Stark (PI), associate professor [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001644 (NSF Award #2001644)] <br> | ||
Mat Sharples, digitization manager | |||
== PENs == | == PENs == | ||
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By expanding the geographic scope to encompass Oregon and the northern Baja California peninsula, the CAP-TCN will now cover the entire California Floristic Province, a biodiversity hotspot of global significance. This will increase the number of species with imaged specimens across their entire range from 1,217 to 1,850, a 55% increase. The addition of 80,000 Oregon and Baja California specimens to CCH2 will facilitate efficient specimen-based analyses of the entire California Floristic Province and for the first time allow a more objective and reproducible specimen-based delineation of its geographic boundaries. Three institutions in California and Nevada will fill key geographic gaps for northwestern California, the northern San Joaquin Valley, and the Mojave Desert. Two additional institutions will significantly increase CAP-TCN representation of 1) the ecologically important and taxonomically complex genus Arctostaphylos (manzanita); and 2) introduced and invasive species of importance to California agriculture, rangelands, and native ecosystems. An estimated 25 additional undergraduates will participate in digitizing activities. Ongoing public outreach efforts about the floras of Oregon and Baja California at Oregon State University and the San Diego Natural History Museum will also benefit from the newly imaged specimens. Data will be shared through online resources, including iDigBio.org. | By expanding the geographic scope to encompass Oregon and the northern Baja California peninsula, the CAP-TCN will now cover the entire California Floristic Province, a biodiversity hotspot of global significance. This will increase the number of species with imaged specimens across their entire range from 1,217 to 1,850, a 55% increase. The addition of 80,000 Oregon and Baja California specimens to CCH2 will facilitate efficient specimen-based analyses of the entire California Floristic Province and for the first time allow a more objective and reproducible specimen-based delineation of its geographic boundaries. Three institutions in California and Nevada will fill key geographic gaps for northwestern California, the northern San Joaquin Valley, and the Mojave Desert. Two additional institutions will significantly increase CAP-TCN representation of 1) the ecologically important and taxonomically complex genus Arctostaphylos (manzanita); and 2) introduced and invasive species of importance to California agriculture, rangelands, and native ecosystems. An estimated 25 additional undergraduates will participate in digitizing activities. Ongoing public outreach efforts about the floras of Oregon and Baja California at Oregon State University and the San Diego Natural History Museum will also benefit from the newly imaged specimens. Data will be shared through online resources, including iDigBio.org. | ||
''Project | ''Project Sponsors'': Oregon State University [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001644 (NSF Award 2001644)], San Francisco State University [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001641 (NSF Award 2001641)], and San Diego Natural History Museum [https://www.nsf.gov/awardsearch/showAward?AWD_ID=2001535 (NSF Award 2001535)] | ||
'' | ''Principal Investigators (PIs)'': [mailto:listona@science.oregonstate.edu Aaron Liston (OSC)], Genevieve Walden (CDA), Jenn Yost (OBI), Aimee Wyrick-Brownworth (PUA), Layla Aerne Hains (SD), Jon Rebman (SD), Jason Cantley (SFSU), Andrew Gardner (SHTC), and Lloyd Stark (UNLV) |
edits